RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 ZDHHC14Q8IZN3 488 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 GPD1LQ8N335 351 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 SH2D3CQ8N5H7 860 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 UBR7Q8N806 425 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 FBXL13Q8NEE6 735 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 ZSWIM2Q8NEG5 633 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 ZNF564Q8TBZ8 553 aaPredicted RBP5.38□□□□□ -1.55
SDC2-204ENST00000519914 KRT35Q92764 455 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 P3H4Q92791 437 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 KAT5Q92993 513 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 ART4Q93070 314 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 ITFG2Q969R8 447 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 RMDN3Q96TC7 470 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 ROPN1BQ9BZX4 212 aaPredicted RBP5.38□□□□□ -1.55
SDC2-204ENST00000519914 PABPC3Q9H361 631 aaKnown RBP5.38□□□□□ -1.55
SDC2-204ENST00000519914 PCIF1Q9H4Z3 704 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 ROPN1Q9HAT0 212 aaPredicted RBP5.38□□□□□ -1.55
SDC2-204ENST00000519914 AS3MTQ9HBK9 375 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 RAVER2Q9HCJ3 691 aaKnown RBP5.38□□□□□ -1.55
SDC2-204ENST00000519914 POLD4Q9HCU8 107 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 XPNPEP1Q9NQW7 623 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 RAB20Q9NX57 234 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 WHRNQ9P202 907 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 CTTNBP2NLQ9P2B4 639 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.38□□□□□ -1.55
SDC2-204ENST00000519914 TCEAL9Q9UHQ7 104 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 ZNF214Q9UL59 606 aaPredicted RBP5.38□□□□□ -1.55
SDC2-204ENST00000519914 PPP2R3BQ9Y5P8 575 aa5.38□□□□□ -1.55
SDC2-204ENST00000519914 ANK1P16157 1881 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 ZSWIM8A7E2V4 1837 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 ADGRA3Q8IWK6 1321 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 DENND3A2RUS2 1198 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 CCDC169A6NNP5 214 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 DDX39AO00148 427 aaKnown RBP5.37□□□□□ -1.55
SDC2-204ENST00000519914 MEFVO15553 781 aaPredicted RBP5.37□□□□□ -1.55
SDC2-204ENST00000519914 PSTPIP1O43586 416 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 TIAF1O95411 115 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 LDHAP00338 332 aaKnown RBP5.37□□□□□ -1.55
SDC2-204ENST00000519914 AGTP01019 485 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 C4BPAP04003 597 aaKnown RBP5.37□□□□□ -1.55
SDC2-204ENST00000519914 MMEP08473 750 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 RARGP13631 454 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 ACO1P21399 889 aaKnown RBP5.37□□□□□ -1.55
SDC2-204ENST00000519914 ARL2P36404 184 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 MAP2K2P36507 400 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 NAMPTP43490 491 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 MMP13P45452 471 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 CCT5P48643 541 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 PDE6CP51160 858 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 DNA2P51530 1060 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 ZNF132P52740 706 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 RNASE9P60153 205 aaKnown RBP5.37□□□□□ -1.55
SDC2-204ENST00000519914 IRX1P78414 480 aaPredicted RBP5.37□□□□□ -1.55
SDC2-204ENST00000519914 CAV1Q03135 178 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 SOX4Q06945 474 aaPredicted RBP5.37□□□□□ -1.55
SDC2-204ENST00000519914 ADCY2Q08462 1091 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 SLMAPQ14BN4 828 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 PLCB4Q15147 1175 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 ZYXQ15942 572 aaKnown RBP5.37□□□□□ -1.55
SDC2-204ENST00000519914 ZACNQ401N2 412 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 ERMARDQ5T6L9 678 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 FAM102BQ5T8I3 360 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 ARHGEF16Q5VV41 709 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 NAA35Q5VZE5 725 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 ALKBH2Q6NS38 261 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 TTC27Q6P3X3 843 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 CATSPERGQ6ZRH7 1159 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 TRMT10CQ7L0Y3 403 aaKnown RBP5.37□□□□□ -1.55
SDC2-204ENST00000519914 SLC47A2Q86VL8 602 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 MCOLN2Q8IZK6 566 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 DNERQ8NFT8 737 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 MYCBPAPQ8TBZ2 947 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 TAS1R2Q8TE23 839 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 NSUN6Q8TEA1 469 aaKnown RBP5.37□□□□□ -1.55
SDC2-204ENST00000519914 ZNF473Q8WTR7 871 aaKnown RBP5.37□□□□□ -1.55
SDC2-204ENST00000519914 ATG4CQ96DT6 458 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 FAXDC2Q96IV6 333 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 CCT8L2Q96SF2 557 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 TRIM51Q9BSJ1 452 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 NUP85Q9BW27 656 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 CELF4Q9BZC1 486 aaKnown RBP5.37□□□□□ -1.55
SDC2-204ENST00000519914 FOXP3Q9BZS1 431 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 CXorf56Q9H5V9 222 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 DHX33Q9H6R0 707 aaKnown RBP5.37□□□□□ -1.55
SDC2-204ENST00000519914 RPAP3Q9H6T3 665 aaPredicted RBP5.37□□□□□ -1.55
SDC2-204ENST00000519914 ATP6V0A4Q9HBG4 840 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 GPRC5CQ9NQ84 441 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 KMT5AQ9NQR1 393 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 CYP26B1Q9NR63 512 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 HOMER3Q9NSC5 361 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 RNF146Q9NTX7 359 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 MTRF1LQ9UGC7 380 aaKnown RBP5.37□□□□□ -1.55
SDC2-204ENST00000519914 MTUS1Q9ULD2 1270 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 NEU2Q9Y3R4 380 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 PCDHB2Q9Y5E7 798 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 FAM169AQ9Y6X4 670 aa5.37□□□□□ -1.55
SDC2-204ENST00000519914 UMODL1Q5DID0 1318 aa5.36□□□□□ -1.55
SDC2-204ENST00000519914 ADGRA2Q96PE1 1338 aa5.36□□□□□ -1.55
SDC2-204ENST00000519914 PASKQ96RG2 1323 aa5.36□□□□□ -1.55
SDC2-204ENST00000519914 GMNCA6NCL1 334 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms