RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 TBC1D4O60343 1298 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 FKBP6O75344 327 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 EIF2B5Q13144 721 aaKnown RBP12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 NIPA1Q7RTP0 329 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 ITIH5Q86UX2 942 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 METTL16Q86W50 562 aaKnown RBP12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 FAM129AQ9BZQ8 928 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 SIK2Q9H0K1 926 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 DOLKQ9UPQ8 538 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 NPTXRO95502 500 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 NMT1P30419 496 aaKnown RBP12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 AXLP30530 894 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 MLH1P40692 756 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 HIF1AQ16665 826 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 CROCCP3Q8IVE0 287 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 NIF3L1Q9GZT8 377 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 DHX35Q9H5Z1 703 aaKnown RBP12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 SESN1Q9Y6P5 492 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 MYPNQ86TC9 1320 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 PSMC3P17980 439 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 NME3Q13232 169 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 CEP78Q5JTW2 689 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 C4orf33Q8N1A6 199 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 USP38Q8NB14 1042 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 KLHL23Q8NBE8 558 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 SERPINB12Q96P63 405 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 ERP44Q9BS26 406 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 MRPL1Q9BYD6 325 aaKnown RBP12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 CATSPERBQ9H7T0 1116 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 HAO1Q9UJM8 370 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 RAB21Q9UL25 225 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 C2CD2Q9Y426 696 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 H3BRB1 525 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 MTSS1O43312 755 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 SNX2O60749 519 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 TYK2P29597 1187 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 MEI1Q5TIA1 1274 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 PLEKHA7Q6IQ23 1121 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 ZNF280DQ6N043 979 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 IZUMO2Q6UXV1 221 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 ZNF677Q86XU0 584 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 INPP5DQ92835 1189 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 SLC7A5P2Q9GIP4 190 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 TUT1Q9H6E5 874 aaKnown RBP12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 POLE3Q9NRF9 147 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 GJB4Q9NTQ9 266 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 MSRAQ9UJ68 235 aa12.74□□□□□ -0.37
PCDHGA6-201ENST00000517434 STOX1Q6ZVD7 989 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 TRAPPC11Q7Z392 1133 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 ST13P5Q8NFI4 369 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 C1orf54Q8WWF1 131 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 REEP2Q9BRK0 252 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 MRPS26Q9BYN8 205 aaKnown RBP12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 TMEM8AQ9HCN3 771 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 TRIM10Q9UDY6 481 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 FAM50BQ9Y247 325 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 PRG3Q9Y2Y8 225 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 CFAP99D6REC4 459 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 C16orf72Q14CZ0 275 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 DEPDC1Q5TB30 811 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 YTHDF3Q7Z739 585 aaKnown RBP12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 LUZP2Q86TE4 346 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 JAMLQ86YT9 394 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 KRT35Q92764 455 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 CDK5RAP1Q96SZ6 601 aaKnown RBP12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 RBM15Q96T37 977 aaKnown RBP eCLIP12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 PDCD2LQ9BRP1 358 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 TMEM88BA6NKF7 163 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 FTLP02792 175 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 SLC11A2P49281 568 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 DNAJC3Q13217 504 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 CRELD2Q6UXH1 353 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 NLRP9Q7RTR0 991 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 PASD1Q8IV76 773 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 CLEC4FQ8N1N0 589 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 TTC8Q8TAM2 541 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 CALML6Q8TD86 181 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 NUP85Q9BW27 656 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 PABPC3Q9H361 631 aaKnown RBP12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 UVRAGQ9P2Y5 699 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 DDX20Q9UHI6 824 aaKnown RBP12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 MROH7Q68CQ1 1323 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 PRR23D1E9PI22 279 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 NPM3O75607 178 aaKnown RBP12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 CAPN1P07384 714 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 PRR23D2P0DMB1 279 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 GNL1P36915 607 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 ERVK-9P63128 1117 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 ERVK-24P63145 666 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 CAPRIN1Q14444 709 aaKnown RBP12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 SLC29A2Q14542 456 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 LRRC71Q8N4P6 559 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 ATP6V0D2Q8N8Y2 350 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 ATP8B4Q8TF62 1192 aa12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 RNF25Q96BH1 459 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA6-201ENST00000517434 E5RI56 91 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 RALBP11234 206 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 ETFBP38117 255 aa12.72□□□□□ -0.37
PCDHGA6-201ENST00000517434 PRMT2P55345 433 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms