RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 TRIM21P19474 475 aaKnown RBP11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 WEE1P30291 646 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 CDC25CP30307 473 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 CACNA2D1P54289 1103 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 SIGLEC14Q08ET2 396 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 ORC1Q13415 861 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 CUL2Q13617 745 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 TANGO2Q6ICL3 276 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 ST13P5Q8NFI4 369 aaPredicted RBP11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 SMARCD2Q92925 531 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 ELSPBP1Q96BH3 223 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 CYFIP2Q96F07 1278 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 TMEM176AQ96HP8 235 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 CNOT6LQ96LI5 555 aaKnown RBP11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 HEXIM2Q96MH2 286 aaKnown RBP11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 TWNKQ96RR1 684 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 KCNK16Q96T55 309 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 HNRNPABQ99729 332 aaKnown RBP11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 ARID3AQ99856 593 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 SLC46A2Q9BY10 475 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 ZNF518BQ9C0D4 1074 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 DNAI2Q9GZS0 605 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 TASP1Q9H6P5 420 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 ZFP14Q9HCL3 533 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 CSNK1G1Q9HCP0 422 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 TMEM30AQ9NV96 361 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 TMEM63CQ9P1W3 806 aa11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 UXTQ9UBK9 157 aaPredicted RBP11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 MAGED2Q9UNF1 606 aaPredicted RBP11.85□□□□□ -0.51
SCARNA20-201ENST00000516768 TRIOO75962 3097 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 TBXAS1P24557 533 aaPredicted RBP11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 ANXA13P27216 316 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 RAD23BP54727 409 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 GPC5P78333 572 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 LRMPQ12912 555 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 ZNF394Q53GI3 561 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 ARHGAP15Q53QZ3 475 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 TMEM31Q5JXX7 168 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 STXBP5Q5T5C0 1151 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 DENND5BQ6ZUT9 1274 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 BMP8AQ7Z5Y6 402 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 FAM35AQ86V20 835 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 ARID3BQ8IVW6 561 aaPredicted RBP11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 FAM114A1Q8IWE2 563 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 SLC4A11Q8NBS3 891 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 STKLD1Q8NE28 680 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 ZSCAN18Q8TBC5 510 aaPredicted RBP11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 SLC2A14Q8TDB8 520 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 ASIC4Q96FT7 647 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 NT5C1BQ96P26 610 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 MED10Q9BTT4 135 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 TTLL2Q9BWV7 592 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 PLA2G2FQ9BZM2 168 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 SMOC2Q9H3U7 446 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 SAMSN1Q9NSI8 373 aaKnown RBP11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 ANO10Q9NW15 660 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 IL37Q9NZH6 218 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 EHD2Q9NZN4 543 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 WNT16Q9UBV4 365 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 ZMYM5Q9UJ78 669 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 DUSP12Q9UNI6 340 aa11.84□□□□□ -0.51
SCARNA20-201ENST00000516768 PRR33A8MZF0 331 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 TNFRSF10BO14763 440 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 NARSO43776 548 aaKnown RBP11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 AP1G2O75843 785 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 BEST1O76090 585 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 SRFP11831 508 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 CCDC130P13994 396 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 FCARP24071 287 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 MTIF2P46199 727 aaKnown RBP11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 PPP3CCP48454 512 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 USP46P62068 366 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 YWHAEP62258 255 aaKnown RBP11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 GPR158Q5T848 1215 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 PPP1R26Q5T8A7 1209 aaPredicted RBP11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 PHLDB3Q6NSJ2 640 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 MON1AQ86VX9 555 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 NUP93Q8N1F7 819 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 UBR7Q8N806 425 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 ZMIZ2Q8NF64 920 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 E2F7Q96AV8 911 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 SMARCD1Q96GM5 515 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 SMOQ99835 787 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 TUBGCP2Q9BSJ2 902 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 LRFN3Q9BTN0 628 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 SLITRK6Q9H5Y7 841 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 SLC2A4RGQ9NR83 387 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 FAM49BQ9NUQ9 324 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 KIAA1257Q9ULG3 409 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 NFE2L3Q9Y4A8 694 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 ATP8B3O60423 1300 aa11.83□□□□□ -0.52
SCARNA20-201ENST00000516768 GTPBP10A4D1E9 387 aaKnown RBP11.82□□□□□ -0.52
SCARNA20-201ENST00000516768 TMEM221A6NGB7 291 aa11.82□□□□□ -0.52
SCARNA20-201ENST00000516768 M0R296 226 aa11.82□□□□□ -0.52
SCARNA20-201ENST00000516768 PRKCSHP14314 528 aaPredicted RBP11.82□□□□□ -0.52
SCARNA20-201ENST00000516768 ACO1P21399 889 aaKnown RBP11.82□□□□□ -0.52
SCARNA20-201ENST00000516768 DDX6P26196 483 aaKnown RBP eCLIP11.82□□□□□ -0.52
SCARNA20-201ENST00000516768 VIPR2P41587 438 aa11.82□□□□□ -0.52
SCARNA20-201ENST00000516768 MAP3K7CLP57077 242 aa11.82□□□□□ -0.52
SCARNA20-201ENST00000516768 CYP4F8P98187 520 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms