RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 FAM47CQ5HY64 1035 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 PITRM1Q5JRX3 1037 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 PLA2G4FQ68DD2 849 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 MRM1Q6IN84 353 aaKnown RBP-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 ANO7Q6IWH7 933 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 FAM9AQ8IZU1 332 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 CDYL2Q8N8U2 506 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 OR6P1Q8NGX9 317 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 SPATA20Q8TB22 786 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 TBC1D15Q8TC07 691 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 ZNF689Q96CS4 500 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 IGSF21Q96ID5 467 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 MMP28Q9H239 520 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 POFUT1Q9H488 388 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 ASIC5Q9NY37 505 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 AGAP1Q9UPQ3 857 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 CDYLQ9Y232 598 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 MYPNQ86TC9 1320 aa-0.19□□□□□ -2.44
RNU6-539P-201ENST00000516665 A0A0B4J269 797 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 A0A0U1RQF3 1178 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 GSTA4O15217 222 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 PRODHO43272 600 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 TCEA3O75764 348 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 IL6RP08887 468 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 NPSP0C0P6 89 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 WEE2P0C1S8 567 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 RAP2AP10114 183 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 FCGR1AP12314 374 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 ALDH1A3P47895 512 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 CPA2P48052 419 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 LUMP51884 338 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 YPEL5P62699 121 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 Q0VFX4 171 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 TUBB3Q13509 450 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 C6orf15Q6UXA7 325 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 UBE2Q1Q7Z7E8 422 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 MCF2L2Q86YR7 1114 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 FITM2Q8N6M3 262 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 CCDC185Q8N715 623 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 ENGASEQ8NFI3 743 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 DUX5Q96PT3 197 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 LITAFQ99732 161 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 WDR13Q9H1Z4 485 aa-0.2□□□□□ -2.44
RNU6-539P-201ENST00000516665 IGLV3-10A0A075B6K4 115 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 A0A0G2JK05 382 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 ELL2O00472 640 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 MAFGO15525 162 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 PRKNO60260 465 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 RNF8O76064 485 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 CD48P09326 243 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 PABPC1P11940 636 aaKnown RBP-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 FPR3P25089 353 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 PTX3P26022 381 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 CDKN1AP38936 164 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 IARSP41252 1262 aaKnown RBP-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 SCNN1BP51168 640 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 KIF11P52732 1056 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 SEC61A1P61619 476 aaKnown RBP-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 GUCY1A3Q02108 690 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 GRSF1Q12849 480 aaKnown RBP eCLIP-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 PEX6Q13608 980 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 CNGA3Q16281 694 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 KIF19Q2TAC6 998 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 FOXB2Q5VYV0 432 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 HIST2H2BDQ6DRA6 164 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 ZCCHC8Q6NZY4 707 aaKnown RBP-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 ARHGAP11AQ6P4F7 1023 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 LMBR1LQ6UX01 489 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 OVCH1Q7RTY7 1134 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 LRRC8CQ8TDW0 803 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 ADAMTS18Q8TE60 1221 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 ZNF480Q8WV37 535 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 SHDQ96IW2 340 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 CIPCQ9C0C6 399 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 GINM1Q9NU53 330 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 VTI1BQ9UEU0 232 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 USP18Q9UMW8 372 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 DLGAP4Q9Y2H0 992 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 COQ6Q9Y2Z9 468 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 NEU2Q9Y3R4 380 aa-0.21□□□□□ -2.44
RNU6-539P-201ENST00000516665 CCDC195A0A1B0GUA6 201 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 RPS10-NUDT3A0A1W2PQS6 291 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 KCNQ3O43525 872 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 SORBS3O60504 671 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 KRT6AP02538 564 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 KRT6BP04259 564 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 ZNF12P17014 697 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 CTSSP25774 331 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 KRT6CP48668 564 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 HSD17B4P51659 736 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 RIGQ13278 110 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 SP140Q13342 867 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 STIM1Q13586 685 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 SLC10A6Q3KNW5 377 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 RNASE12Q5GAN4 147 aaKnown RBP-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 YOD1Q5VVQ6 348 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 SWSAP1Q6NVH7 229 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 C9orf139Q6ZV77 190 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 HS2ST1Q7LGA3 356 aa-0.22□□□□□ -2.44
RNU6-539P-201ENST00000516665 BCDIN3DQ7Z5W3 292 aaKnown RBP-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms