RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 CTNNA1P35221 906 aaKnown RBP9.65□□□□□ -0.86
CPNE4-213ENST00000515418 GJC1P36383 396 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 PBX3P40426 434 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 LHX1P48742 406 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 CTCFP49711 727 aaPredicted RBP9.65□□□□□ -0.86
CPNE4-213ENST00000515418 FAM102AQ5T9C2 384 aaPredicted RBP9.65□□□□□ -0.86
CPNE4-213ENST00000515418 C1orf53Q5VUE5 145 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 FAM183BPQ6ZVS7 135 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 TMEM86AQ8N2M4 240 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 UBL4BQ8N7F7 174 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 URGCPQ8TCY9 931 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 CLEC4CQ8WTT0 213 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 HDAC7Q8WUI4 952 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 NDRG1Q92597 394 aaKnown RBP9.65□□□□□ -0.86
CPNE4-213ENST00000515418 MCRS1Q96EZ8 462 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 RNPC3Q96LT9 517 aaKnown RBP9.65□□□□□ -0.86
CPNE4-213ENST00000515418 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.65□□□□□ -0.86
CPNE4-213ENST00000515418 MED10Q9BTT4 135 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 LRRC1Q9BTT6 524 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 SLC4A5Q9BY07 1137 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 PARD6BQ9BYG5 372 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 C11orf49Q9H6J7 331 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 ANKZF1Q9H8Y5 726 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 TMEM30AQ9NV96 361 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 IP6K2Q9UHH9 426 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 STRIP2Q9ULQ0 834 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 TCRBV7S2A1N4TA0A589 114 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 TRIM43BA6NCK2 446 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 MIF4GDA9UHW6 222 aaKnown RBP9.64□□□□□ -0.87
CPNE4-213ENST00000515418 M0QZQ0 153 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 CES2O00748 559 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 ZMYND10O75800 440 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 CLTBP09497 229 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 ODC1P11926 461 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 CACNA2D1P54289 1103 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 SLC7A5Q01650 507 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 BST2Q10589 180 aaKnown RBP9.64□□□□□ -0.87
CPNE4-213ENST00000515418 PKN2Q16513 984 aaKnown RBP9.64□□□□□ -0.87
CPNE4-213ENST00000515418 RAB6CQ53S08 254 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 SH3PXD2AQ5TCZ1 1133 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 TXNRD3NBQ6F5E7 133 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 TRNP1Q6NT89 227 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 CC2D1AQ6P1N0 951 aaPredicted RBP9.64□□□□□ -0.87
CPNE4-213ENST00000515418 TMEM110Q86TL2 294 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 LRRTM3Q86VH5 581 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 RASGEF1CQ8N431 466 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 ARFGAP1Q8N6T3 406 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 ACTRT1Q8TDG2 376 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 ANKRD7Q92527 254 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 APBB2Q92870 758 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 KHSRPQ92945 711 aaKnown RBP eCLIP9.64□□□□□ -0.87
CPNE4-213ENST00000515418 TRIM43Q96BQ3 446 aaPredicted RBP9.64□□□□□ -0.87
CPNE4-213ENST00000515418 ACSF2Q96CM8 615 aaPredicted RBP9.64□□□□□ -0.87
CPNE4-213ENST00000515418 PCED1BQ96HM7 432 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 B3GALT6Q96L58 329 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 UROC1Q96N76 676 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 KCNK16Q96T55 309 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 PNKPQ96T60 521 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 HNRNPABQ99729 332 aaKnown RBP9.64□□□□□ -0.87
CPNE4-213ENST00000515418 SYT15Q9BQS2 421 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 RAB6CQ9H0N0 254 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 ELAC1Q9H777 363 aaKnown RBP9.64□□□□□ -0.87
CPNE4-213ENST00000515418 NRDE2Q9H7Z3 1164 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 PRDM5Q9NQX1 630 aaPredicted RBP9.64□□□□□ -0.87
CPNE4-213ENST00000515418 KANSL3Q9P2N6 904 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 RNF14Q9UBS8 474 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 CCDC66A2RUB6 948 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 TBKBP1A7MCY6 615 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 PGRMC1O00264 195 aaKnown RBP9.64□□□□□ -0.87
CPNE4-213ENST00000515418 NRP1O14786 923 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 PAPSS1O43252 624 aaPredicted RBP9.64□□□□□ -0.87
CPNE4-213ENST00000515418 TADA2AO75478 443 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 FAM163BP0C2L3 166 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 NDUFV1P49821 464 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 MAP3K7CLP57077 242 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 LONRF2Q1L5Z9 754 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 FAM117BQ6P1L5 589 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 ZNF572Q7Z3I7 529 aaPredicted RBP9.64□□□□□ -0.87
CPNE4-213ENST00000515418 METTL23Q86XA0 190 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 KLHL7Q8IXQ5 586 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 ZDHHC14Q8IZN3 488 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 GPR161Q8N6U8 529 aaKnown RBP9.64□□□□□ -0.87
CPNE4-213ENST00000515418 OR10T2Q8NGX3 314 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 SUSD3Q96L08 255 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 KRT12Q99456 494 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 TMEM106CQ9BVX2 250 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 DUSP16Q9BY84 665 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 CARD9Q9H257 536 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 TMLHEQ9NVH6 421 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 KLHL11Q9NVR0 708 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 MICAL3Q7RTP6 2002 aa9.64□□□□□ -0.87
CPNE4-213ENST00000515418 PI4K2BG5E9Z4 385 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 KRIT1O00522 736 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 ALDH2P05091 517 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 CYP11A1P05108 521 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 ACRP10323 421 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 CSF2RAP15509 400 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 PSMA2P25787 234 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 CTNNA2P26232 953 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 FLT3P36888 993 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms