RNA–Protein interactions for RNA: ENST00000515109.5

PRDM5-212, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-212ENST00000515109 SMC6Q96SB8 1091 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 DNAJC25-GNG10A0A024R161 153 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 CFAP73A6NFT4 308 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 M0QYV0 167 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 MGRN1O60291 552 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 CILPO75339 1184 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 CSDE1O75534 798 aaKnown RBP18.29■□□□□ 0.52
PRDM5-212ENST00000515109 ASMTLO95671 621 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 RDXP35241 583 aaKnown RBP18.29■□□□□ 0.52
PRDM5-212ENST00000515109 IREB2P48200 963 aaKnown RBP18.29■□□□□ 0.52
PRDM5-212ENST00000515109 NCALDP61601 193 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 Q3C1V9 767 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 GALNTL6Q49A17 601 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 FAM47EQ6ZV65 393 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 TBC1D1Q86TI0 1168 aaPredicted RBP18.29■□□□□ 0.52
PRDM5-212ENST00000515109 SULF1Q8IWU6 871 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 C4orf33Q8N1A6 199 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 TAB3Q8N5C8 712 aaPredicted RBP18.29■□□□□ 0.52
PRDM5-212ENST00000515109 NLGN2Q8NFZ4 835 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 CPT1BQ92523 772 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 HSPH1Q92598 858 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 TMEM176AQ96HP8 235 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 PPP1R16BQ96T49 567 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 ECT2Q9H8V3 914 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 SENP1Q9P0U3 644 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 PSMC3IPQ9P2W1 217 aaPredicted RBP18.29■□□□□ 0.52
PRDM5-212ENST00000515109 RBPJLQ9UBG7 517 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 SLC24A2Q9UI40 661 aa18.29■□□□□ 0.52
PRDM5-212ENST00000515109 MIPP30301 263 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 RPL22P35268 128 aaKnown RBP18.28■□□□□ 0.52
PRDM5-212ENST00000515109 PHKA2P46019 1235 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 ARL4CP56559 192 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 GPX6P59796 221 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 DCPSQ96C86 337 aaKnown RBP18.28■□□□□ 0.52
PRDM5-212ENST00000515109 GRAMD1AQ96CP6 724 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 PITPNM3Q9BZ71 974 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 RNPEPQ9H4A4 650 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 PPCSQ9HAB8 311 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 PDGFCQ9NRA1 345 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 KLHL14Q9P2G3 628 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.28■□□□□ 0.52
PRDM5-212ENST00000515109 SMG5Q9UPR3 1016 aaKnown RBP18.28■□□□□ 0.52
PRDM5-212ENST00000515109 CLUHO75153 1309 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 RNF8O76064 485 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 C22orf31O95567 290 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 SPARCL1Q14515 664 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 TAF5Q15542 800 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 FNBP1LQ5T0N5 605 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 FAM228AQ86W67 206 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 ERO1BQ86YB8 467 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 NAT8LQ8N9F0 302 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 DENND1AQ8TEH3 1009 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 PYROXD1Q8WU10 500 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 FAXDC2Q96IV6 333 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 RMDN2Q96LZ7 410 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 IFT122Q9HBG6 1241 aa18.28■□□□□ 0.52
PRDM5-212ENST00000515109 PHBP35232 272 aa18.27■□□□□ 0.52
PRDM5-212ENST00000515109 EIF3EP60228 445 aaKnown RBP18.27■□□□□ 0.52
PRDM5-212ENST00000515109 TNFAIP2Q03169 654 aa18.27■□□□□ 0.52
PRDM5-212ENST00000515109 TTLL4Q14679 1199 aa18.27■□□□□ 0.52
PRDM5-212ENST00000515109 EFHC2Q5JST6 749 aa18.27■□□□□ 0.52
PRDM5-212ENST00000515109 DPH6Q7L8W6 267 aa18.27■□□□□ 0.52
PRDM5-212ENST00000515109 UNC45BQ8IWX7 931 aa18.27■□□□□ 0.52
PRDM5-212ENST00000515109 ATP11CQ8NB49 1132 aa18.27■□□□□ 0.52
PRDM5-212ENST00000515109 MCRS1Q96EZ8 462 aa18.27■□□□□ 0.52
PRDM5-212ENST00000515109 CPB2Q96IY4 423 aa18.27■□□□□ 0.52
PRDM5-212ENST00000515109 ADPGKQ9BRR6 497 aa18.27■□□□□ 0.52
PRDM5-212ENST00000515109 CALN1Q9BXU9 219 aa18.27■□□□□ 0.52
PRDM5-212ENST00000515109 NFKBIZQ9BYH8 718 aa18.27■□□□□ 0.52
PRDM5-212ENST00000515109 ADAM33Q9BZ11 813 aa18.27■□□□□ 0.52
PRDM5-212ENST00000515109 RXFP1Q9HBX9 757 aa18.27■□□□□ 0.52
PRDM5-212ENST00000515109 ERAP1Q9NZ08 941 aa18.27■□□□□ 0.52
PRDM5-212ENST00000515109 USP18Q9UMW8 372 aa18.27■□□□□ 0.52
PRDM5-212ENST00000515109 A0A087WZ62 844 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 CXCL11O14625 94 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 TRUB2O95900 331 aaKnown RBP18.26■□□□□ 0.51
PRDM5-212ENST00000515109 MCF2P10911 925 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 SSTR1P30872 391 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 ATICP31939 592 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 GEMIN4P57678 1058 aaKnown RBP18.26■□□□□ 0.51
PRDM5-212ENST00000515109 BNIP1Q12981 228 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 DNAJC3Q13217 504 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 EFTUD2Q15029 972 aaKnown RBP eCLIP18.26■□□□□ 0.51
PRDM5-212ENST00000515109 MSS51Q4VC12 460 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 FAM102AQ5T9C2 384 aaPredicted RBP18.26■□□□□ 0.51
PRDM5-212ENST00000515109 RNF43Q68DV7 783 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 FITM2Q8N6M3 262 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 CMASQ8NFW8 434 aaPredicted RBP18.26■□□□□ 0.51
PRDM5-212ENST00000515109 CXorf38Q8TB03 319 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 HEXIM2Q96MH2 286 aaKnown RBP18.26■□□□□ 0.51
PRDM5-212ENST00000515109 FDXACB1Q9BRP7 624 aaPredicted RBP18.26■□□□□ 0.51
PRDM5-212ENST00000515109 PHACTR1Q9C0D0 580 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 RABGEF1Q9UJ41 708 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 PNMA3Q9UL41 463 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 A0A1W2PPM1 405 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 APOC4-APOC2K7ER74 178 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 MCF2LO15068 1137 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 APOC2P02655 101 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 P4HA1P13674 534 aa18.26■□□□□ 0.51
PRDM5-212ENST00000515109 CA4P22748 312 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms