RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 SHDQ96IW2 340 aa20.16■□□□□ 0.82
LPCAT1-206ENST00000514484 TSG101Q99816 390 aa20.16■□□□□ 0.82
LPCAT1-206ENST00000514484 SLC46A2Q9BY10 475 aa20.16■□□□□ 0.82
LPCAT1-206ENST00000514484 CHMP5Q9NZZ3 219 aa20.16■□□□□ 0.82
LPCAT1-206ENST00000514484 MTF2Q9Y483 593 aaPredicted RBP20.16■□□□□ 0.82
LPCAT1-206ENST00000514484 KANSL1LA0AUZ9 987 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 F8VP50 259 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 DPYSL4O14531 572 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 ZNF263O14978 683 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 CETN3O15182 167 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 ASS1P00966 412 aaKnown RBP20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 ASPAP45381 313 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 USP46P62068 366 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 PRKCQQ04759 706 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 SGSM1Q2NKQ1 1148 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 COBLL1Q53SF7 1204 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 ANKRD40Q6AI12 368 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 VSTM1Q6UX27 236 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 ADSSL1Q8N142 457 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 DTWD2Q8NBA8 298 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 DNASE1L2Q92874 299 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 TRMT2BQ96GJ1 504 aaKnown RBP20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 ZFYVE19Q96K21 471 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 DDX23Q9BUQ8 820 aaKnown RBP20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 B3GNT5Q9BYG0 378 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 APOBEC3GQ9HC16 384 aaKnown RBP20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 TRPC7Q9HCX4 862 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 SIT1Q9Y3P8 196 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 VPS13AQ96RL7 3174 aa20.15■□□□□ 0.82
LPCAT1-206ENST00000514484 BIN1O00499 593 aa20.14■□□□□ 0.81
LPCAT1-206ENST00000514484 FAM163BP0C2L3 166 aa20.14■□□□□ 0.81
LPCAT1-206ENST00000514484 P4HA1P13674 534 aa20.14■□□□□ 0.81
LPCAT1-206ENST00000514484 GLULP15104 373 aa20.14■□□□□ 0.81
LPCAT1-206ENST00000514484 CD44P16070 742 aaKnown RBP20.14■□□□□ 0.81
LPCAT1-206ENST00000514484 ANXA13P27216 316 aa20.14■□□□□ 0.81
LPCAT1-206ENST00000514484 ANP32AP39687 249 aaKnown RBP20.14■□□□□ 0.81
LPCAT1-206ENST00000514484 NOP14P78316 857 aaKnown RBP20.14■□□□□ 0.81
LPCAT1-206ENST00000514484 ACOT1Q86TX2 421 aa20.14■□□□□ 0.81
LPCAT1-206ENST00000514484 CMTM8Q8IZV2 173 aa20.14■□□□□ 0.81
LPCAT1-206ENST00000514484 MRPS31Q92665 395 aaKnown RBP20.14■□□□□ 0.81
LPCAT1-206ENST00000514484 IRF7Q92985 503 aa20.14■□□□□ 0.81
LPCAT1-206ENST00000514484 E2F7Q96AV8 911 aa20.14■□□□□ 0.81
LPCAT1-206ENST00000514484 TMEM8AQ9HCN3 771 aa20.14■□□□□ 0.81
LPCAT1-206ENST00000514484 UXTQ9UBK9 157 aaPredicted RBP20.14■□□□□ 0.81
LPCAT1-206ENST00000514484 CCL26Q9Y258 94 aa20.14■□□□□ 0.81
LPCAT1-206ENST00000514484 MYO15AQ9UKN7 3530 aa20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 SHISA7A6NL88 538 aa20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 ARNTLO00327 626 aa20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 TRIM66O15016 1216 aa20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 TARSP26639 723 aaKnown RBP20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 NDST1P52848 882 aa20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 NUBP1P53384 320 aa20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 FCHO2Q0JRZ9 810 aa20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 DCAF17Q5H9S7 520 aaPredicted RBP20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 KLHL10Q6JEL2 608 aa20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 FAM35AQ86V20 835 aa20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 TTC8Q8TAM2 541 aa20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 TAF4BQ92750 862 aa20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 SPATA17Q96L03 361 aa20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 MYRFLQ96LU7 910 aa20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 MED10Q9BTT4 135 aa20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 IMPG2Q9BZV3 1241 aa20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 ELOVL4Q9GZR5 314 aa20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 LTB4R2Q9NPC1 389 aa20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 DLGAP2Q9P1A6 1054 aa20.13■□□□□ 0.81
LPCAT1-206ENST00000514484 FAM170BA6NMN3 283 aa20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 CCDC130P13994 396 aa20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 BMP6P22004 513 aa20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 AVPR1AP37288 418 aa20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 SOX9P48436 509 aa20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 MXI1P50539 228 aa20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 IFRD2Q12894 506 aaPredicted RBP20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 TCERG1LQ5VWI1 586 aa20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 DENND5BQ6ZUT9 1274 aa20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 ZC3H3Q8IXZ2 948 aaKnown RBP20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 ELOA2Q8IYF1 753 aaPredicted RBP20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 TTC16Q8NEE8 873 aa20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 RIN3Q8TB24 985 aa20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 BPIFB1Q8TDL5 484 aa20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 SEMA4DQ92854 862 aa20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 ATOH1Q92858 354 aaPredicted RBP20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 USP13Q92995 863 aaPredicted RBP20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 SLC22A12Q96S37 553 aa20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 BCO2Q9BYV7 579 aa20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 FAM49BQ9NUQ9 324 aa20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 NDRG2Q9UN36 371 aaKnown RBP20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 PIAS3Q9Y6X2 628 aa20.12■□□□□ 0.81
LPCAT1-206ENST00000514484 PIEZO1Q92508 2521 aa20.11■□□□□ 0.81
LPCAT1-206ENST00000514484 C2orf78A6NCI8 922 aa20.11■□□□□ 0.81
LPCAT1-206ENST00000514484 PSMA7O14818 248 aa20.11■□□□□ 0.81
LPCAT1-206ENST00000514484 CHADO15335 359 aa20.11■□□□□ 0.81
LPCAT1-206ENST00000514484 CD58P19256 250 aa20.11■□□□□ 0.81
LPCAT1-206ENST00000514484 DDX6P26196 483 aaKnown RBP eCLIP20.11■□□□□ 0.81
LPCAT1-206ENST00000514484 FKBP3Q00688 224 aaKnown RBP20.11■□□□□ 0.81
LPCAT1-206ENST00000514484 ENPEPQ07075 957 aa20.11■□□□□ 0.81
LPCAT1-206ENST00000514484 STIM1Q13586 685 aa20.11■□□□□ 0.81
LPCAT1-206ENST00000514484 ANGPT1Q15389 498 aa20.11■□□□□ 0.81
LPCAT1-206ENST00000514484 KRT39Q6A163 491 aa20.11■□□□□ 0.81
LPCAT1-206ENST00000514484 MON1AQ86VX9 555 aa20.11■□□□□ 0.81
LPCAT1-206ENST00000514484 CELF5Q8N6W0 485 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms