RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 BSNDQ8WZ55 320 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 SEPT8Q92599 483 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 APBB2Q92870 758 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 TMEM143Q96AN5 459 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 PABPC5Q96DU9 382 aaKnown RBP10.07□□□□□ -0.8
MSH3-203ENST00000512531 SH2D3AQ9BRG2 576 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 SYT11Q9BT88 431 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 KIFC3Q9BVG8 833 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 UBXN6Q9BZV1 441 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 GPR88Q9GZN0 384 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 TSPYL1Q9H0U9 437 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 THAP2Q9H0W7 228 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 TSPAN10Q9H1Z9 355 aaPredicted RBP10.07□□□□□ -0.8
MSH3-203ENST00000512531 FAM124BQ9H5Z6 455 aaPredicted RBP10.07□□□□□ -0.8
MSH3-203ENST00000512531 EPB41L5Q9HCM4 733 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 CD320Q9NPF0 282 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 ANKFY1Q9P2R3 1169 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 MTRF1LQ9UGC7 380 aaKnown RBP10.07□□□□□ -0.8
MSH3-203ENST00000512531 HPCAL4Q9UM19 191 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 GSTTP1A0A1W2PQM5 241 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 A0A1W2PRU2 124 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 C17orf102A2RUQ5 167 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 GOLGA6CA6NDK9 693 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 MYO1FO00160 1098 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 OGTO15294 1046 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 MED7O43513 233 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 SASH3O75995 380 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 HLA-DRAP01903 254 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 CYP1A2P05177 515 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 PRKCBP05771 671 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 RB1P06400 928 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 TMEM191BP0C7N4 346 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 ZNF286BP0CG31 522 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 GOLGA6DP0CG33 693 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 DESP17661 470 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 KCNA5P22460 613 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 CTNNA2P26232 953 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 RWDD2BP57060 319 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 POU5F1BQ06416 359 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 CUL2Q13617 745 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 TARBP2Q15633 366 aaKnown RBP10.06□□□□□ -0.8
MSH3-203ENST00000512531 SGSM1Q2NKQ1 1148 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 FAM26DQ5JW98 314 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.06□□□□□ -0.8
MSH3-203ENST00000512531 TMC7Q7Z402 723 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 TMCO2Q7Z6W1 182 aaPredicted RBP10.06□□□□□ -0.8
MSH3-203ENST00000512531 RPAINQ86UA6 219 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 BRSK2Q8IWQ3 736 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 KLHL7Q8IXQ5 586 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 RGL4Q8IZJ4 473 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 ARFGAP2Q8N6H7 521 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 TAS1R2Q8TE23 839 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 GRK7Q8WTQ7 553 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 WNT8BQ93098 351 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 MS4A14Q96JA4 679 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 C17orf80Q9BSJ5 609 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 NUP85Q9BW27 656 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 MIS12Q9H081 205 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 LMAN2LQ9H0V9 348 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 BCAS3Q9H6U6 928 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 ETNK1Q9HBU6 452 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 PRMT7Q9NVM4 692 aaPredicted RBP10.06□□□□□ -0.8
MSH3-203ENST00000512531 GOLGA6AQ9NYA3 693 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 CALCOCO1Q9P1Z2 691 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 TMEM59LQ9UK28 342 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 RWDD3Q9Y3V2 267 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 PCDHB4Q9Y5E5 795 aa10.06□□□□□ -0.8
MSH3-203ENST00000512531 A0A0B4J269 797 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 TISP43B9A030 160 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 C5orf67F2Z3F1 127 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 SART1O43290 800 aaKnown RBP10.05□□□□□ -0.8
MSH3-203ENST00000512531 LSM8O95777 96 aaKnown RBP10.05□□□□□ -0.8
MSH3-203ENST00000512531 FGGP02679 453 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 RPLP2P05387 115 aaKnown RBP10.05□□□□□ -0.8
MSH3-203ENST00000512531 CALB1P05937 261 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 MPSTP25325 297 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 POLR2BP30876 1174 aaKnown RBP10.05□□□□□ -0.8
MSH3-203ENST00000512531 THPOP40225 353 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 MESDQ14696 234 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 CLEC16AQ2KHT3 1053 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 C1orf220Q5T0J3 134 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 CDCA2Q69YH5 1023 aaPredicted RBP10.05□□□□□ -0.8
MSH3-203ENST00000512531 MPZL3Q6UWV2 235 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 LRIG3Q6UXM1 1119 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 C15orf39Q6ZRI6 1047 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 SYDE1Q6ZW31 735 aaPredicted RBP10.05□□□□□ -0.8
MSH3-203ENST00000512531 TMEM192Q8IY95 271 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 GPR20Q99678 358 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 ZSWIM1Q9BR11 485 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 NFKBIZQ9BYH8 718 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 ZNF518BQ9C0D4 1074 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 NSUN3Q9H649 340 aaKnown RBP10.05□□□□□ -0.8
MSH3-203ENST00000512531 RNF19AQ9NV58 838 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 CNOT8Q9UFF9 292 aaKnown RBP10.05□□□□□ -0.8
MSH3-203ENST00000512531 NOCTQ9UK39 431 aaKnown RBP10.05□□□□□ -0.8
MSH3-203ENST00000512531 AJAP1Q9UKB5 411 aaPredicted RBP10.05□□□□□ -0.8
MSH3-203ENST00000512531 CDV3Q9UKY7 258 aaKnown RBP10.05□□□□□ -0.8
MSH3-203ENST00000512531 STRIP2Q9ULQ0 834 aa10.05□□□□□ -0.8
MSH3-203ENST00000512531 PACSIN2Q9UNF0 486 aaPredicted RBP10.05□□□□□ -0.8
MSH3-203ENST00000512531 MAP4K5Q9Y4K4 846 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms