RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 FAM122AQ96E09 287 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 DHTKD1Q96HY7 919 aaPredicted RBP12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 SHDQ96IW2 340 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 CEP295NLQ96MC4 621 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 BCO2Q9BYV7 579 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 ZNF518BQ9C0D4 1074 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 MMRN2Q9H8L6 949 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 BRD9Q9H8M2 597 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 TRPV5Q9NQA5 729 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 OBP2AQ9NY56 170 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 UXTQ9UBK9 157 aaPredicted RBP12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 ZMYM5Q9UJ78 669 aa12.38□□□□□ -0.43
SH3RF1-205ENST00000511421 SOBPA7XYQ1 873 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 F8VP50 259 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 ARNTLO00327 626 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 CLDN5O00501 218 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 STK25O00506 426 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 PSMA7O14818 248 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 CLSTN1O94985 981 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 DDX6P26196 483 aaKnown RBP eCLIP12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 NOP14P78316 857 aaKnown RBP12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 NHLH1Q02575 133 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 TXNDC8Q6A555 127 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 PAQR9Q6ZVX9 377 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 MON1AQ86VX9 555 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 CMTM8Q8IZV2 173 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 CRYBG2Q8N1P7 616 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 MAB21L3Q8N8X9 362 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 SEMA4DQ92854 862 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 IRF7Q92985 503 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 C8orf48Q96LL4 319 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 FOXQ1Q9C009 403 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 HEBP1Q9NRV9 189 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 DLGAP2Q9P1A6 1054 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 HMGXB4Q9UGU5 601 aa12.37□□□□□ -0.43
SH3RF1-205ENST00000511421 COL4A3Q01955 1670 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 PTPRDP23468 1912 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 KANSL1LA0AUZ9 987 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 ZNF263O14978 683 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 TRIM66O15016 1216 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 PPP1R2P41236 205 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 MXI1P50539 228 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 NDST1P52848 882 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 PTPN5P54829 565 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 USP46P62068 366 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 STIM1Q13586 685 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 TTI2Q6NXR4 508 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 DENND5BQ6ZUT9 1274 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 ACOT1Q86TX2 421 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 UNC93AQ86WB7 457 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 CCDC105Q8IYK2 499 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 PJA1Q8NG27 643 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 MRPS31Q92665 395 aaKnown RBP12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 TNIP3Q96KP6 325 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 DUSP9Q99956 384 aaKnown RBP12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 TTLL2Q9BWV7 592 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 IMPG2Q9BZV3 1241 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 ELOVL4Q9GZR5 314 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 SMG9Q9H0W8 520 aaKnown RBP12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 SIT1Q9Y3P8 196 aa12.36□□□□□ -0.43
SH3RF1-205ENST00000511421 BIN1O00499 593 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 DPYSL4O14531 572 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 CHADO15335 359 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 DCNP07585 359 aaKnown RBP12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 GLULP15104 373 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 CD72P21854 359 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 RFX1P22670 979 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 INCA1Q0VD86 236 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 ORC1Q13415 861 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 CBWD6Q4V339 395 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 CBWD3Q5JTY5 395 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 CBWD5Q5RIA9 395 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 FOXR2Q6PJQ5 311 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 TPRG1Q6ZUI0 275 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 FAM35AQ86V20 835 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 FUKQ8N0W3 1084 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 DTWD2Q8NBA8 298 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 FBXL13Q8NEE6 735 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 USP13Q92995 863 aaPredicted RBP12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 TWNKQ96RR1 684 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 NIF3L1Q9GZT8 377 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 CYP3A43Q9HB55 503 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 RAB20Q9NX57 234 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 CCL26Q9Y258 94 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 MTF2Q9Y483 593 aaPredicted RBP12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 DENND4CQ5VZ89 1909 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 STX10O60499 249 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 ANXA13P27216 316 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 CAMK4Q16566 473 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 KLHL10Q6JEL2 608 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 FILIP1Q7Z7B0 1213 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 YAF2Q8IY57 180 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 CELF5Q8N6W0 485 aaKnown RBP12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 BPIFB1Q8TDL5 484 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 WHAMMQ8TF30 809 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 NELFBQ8WX92 580 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 SLC35C1Q96A29 364 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 CEP63Q96MT8 703 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 SLC22A12Q96S37 553 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms