RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 TBX4P57082 545 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 MEA1Q16626 185 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 MEI1Q5TIA1 1274 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 EMC10Q5UCC4 262 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 PEX26Q7Z412 305 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 CDKL2Q92772 493 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 FER1L6Q2WGJ9 1857 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 IGLV3-22A0A075B6J6 115 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 IGSF6O95976 241 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 RHOCP08134 193 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 SYPP08247 313 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 MBTD1Q05BQ5 628 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 FAAP100Q0VG06 881 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 SNW1Q13573 536 aaKnown RBP10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 SLC12A1Q13621 1099 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 UBXN2BQ14CS0 331 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 ITPRIPL2Q3MIP1 535 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 STRADAQ7RTN6 431 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 KIAA1958Q8N8K9 716 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 KCTD6Q8NC69 237 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 CASKIN2Q8WXE0 1202 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 DCUN1D1Q96GG9 259 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 NXF3Q9H4D5 531 aaKnown RBP10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 FAM207AQ9NSI2 230 aaPredicted RBP10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 ARHGAP28Q9P2N2 729 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 SMIM28A0A1B0GU29 152 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 ARL5CA6NH57 179 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 IVLP07476 585 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 AKAP5P24588 427 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 PPP1R7Q15435 360 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 CCDC85BQ15834 202 aaPredicted RBP10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 FAM102AQ5T9C2 384 aaPredicted RBP10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 RBM23Q86U06 439 aaKnown RBP10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 RGL4Q8IZJ4 473 aa10.14□□□□□ -0.79
POLR2J3-215ENST00000511313 NRP1O14786 923 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 CCNE2O96020 404 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 PDGFRBP09619 1106 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 TNNT1P13805 278 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 EPC2Q52LR7 807 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 MDH1BQ5I0G3 518 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 RFX6Q8HWS3 928 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 OXR1Q8N573 874 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 OR8D1Q8WZ84 308 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 MMTAG2Q9BU76 263 aaKnown RBP10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 NLRC4Q9NPP4 1024 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 CNGB3Q9NQW8 809 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 H3BNC9 293 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 WARSP23381 471 aaKnown RBP10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 GARSP41250 739 aaKnown RBP10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 RPS6KA1Q15418 735 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 FNDC3BQ53EP0 1204 aaKnown RBP10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 HABP4Q5JVS0 413 aaKnown RBP10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 GLRA4Q5JXX5 417 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 ANO5Q75V66 913 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 DNAJC5GQ8N7S2 189 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 TMEM161BQ8NDZ6 487 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 CMASQ8NFW8 434 aaPredicted RBP10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 ZNF461Q8TAF7 563 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 FAM174AQ8TBP5 190 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 BPIFB1Q8TDL5 484 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 TBCBQ99426 244 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 DDX23Q9BUQ8 820 aaKnown RBP10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 PDE11AQ9HCR9 933 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 MAN1C1Q9NR34 630 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 KIAA1522Q9P206 1035 aaPredicted RBP10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 PER2O15055 1255 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 INTS6LQ5JSJ4 861 aaKnown RBP10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 COL13A1Q5TAT6 717 aaPredicted RBP10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 CDCA2Q69YH5 1023 aaPredicted RBP10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 KLHL23Q8NBE8 558 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 TRIM58Q8NG06 486 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 TEKT4Q8WW24 435 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 ZIC5Q96T25 663 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 PHF7Q9BWX1 381 aaPredicted RBP10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 COL20A1Q9P218 1284 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 CDY1Q9Y6F8 540 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 MYH13Q9UKX3 1938 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 SMAPO00193 183 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 ACO1P21399 889 aaKnown RBP10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 SKP1P63208 163 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 PDE1BQ01064 536 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 BMT2Q1RMZ1 405 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 BRMS1LQ5PSV4 323 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 JADE1Q6IE81 842 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 FOXJ1Q92949 421 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 PRKD2Q9BZL6 878 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 SLC7A5P2Q9GIP4 190 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 IQCGQ9H095 443 aaKnown RBP10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 PDZD7Q9H5P4 517 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 UBE2ZQ9H832 354 aaPredicted RBP10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 MYO1AQ9UBC5 1043 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 RNF14Q9UBS8 474 aa10.13□□□□□ -0.79
POLR2J3-215ENST00000511313 LRRC37AA6NMS7 1700 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 IGKV6D-21A0A0A0MT36 114 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 TMX2-CTNND1H3BSU7 103 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 GRIN2DO15399 1336 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 FGF10O15520 208 aaPredicted RBP10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 LATS1O95835 1130 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 CDK7P50613 346 aa10.12□□□□□ -0.79
POLR2J3-215ENST00000511313 CCR3P51677 355 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms