RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 SHISA7A6NL88 538 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 H7C4K7 107 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 CLDN5O00501 218 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 DLL1O00548 723 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 TRAPPC3O43617 180 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 NARSO43776 548 aaKnown RBP7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 TACC1O75410 805 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 CALCAP01258 141 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 RHOP08100 348 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 HAPLN1P10915 354 aaPredicted RBP7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 HMGA1P17096 107 aaKnown RBP7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 PNPLA4P41247 253 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 PIK3CAP42336 1068 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 MTHFRP42898 656 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 MXI1P50539 228 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 MARSP56192 900 aaKnown RBP7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 NOP14P78316 857 aaKnown RBP7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 LRRC63Q05C16 580 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 DUSP4Q13115 394 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 PAK1Q13153 545 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 ADAM9Q13443 819 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 BIRC3Q13489 604 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 MTMR3Q13615 1198 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 HTR4Q13639 388 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 SURF1Q15526 300 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 SWI5Q1ZZU3 235 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 AAK1Q2M2I8 961 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 ZNF699Q32M78 642 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 PPM1LQ5SGD2 360 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 PDXDC1Q6P996 788 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 FOXR2Q6PJQ5 311 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 ANKMY2Q8IV38 441 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 C1orf216Q8TAB5 229 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 GPR152Q8TDT2 470 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 ING5Q8WYH8 240 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 ZSWIM3Q96MP5 696 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 FNBP1Q96RU3 617 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 SYT15Q9BQS2 421 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 FUCA2Q9BTY2 467 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 BCO2Q9BYV7 579 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 ZNF518BQ9C0D4 1074 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 CYP4F11Q9HBI6 524 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 PRKAG3Q9UGI9 489 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 DENND4CQ5VZ89 1909 aa7.71□□□□□ -1.18
TOPBP1-207ENST00000509162 MYO16Q9Y6X6 1858 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 ANAPC1Q9H1A4 1944 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 PSMA7O14818 248 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 AXIN1O15169 862 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 PDGFBP01127 241 aaPredicted RBP7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 HNRNPA1P09651 372 aaKnown RBP eCLIP7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 SRGAP2BP0DMP2 458 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 CYP2F1P24903 491 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 PSMC2P35998 433 aaKnown RBP7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 PGFP49763 221 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 SKOR1P84550 965 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 CYP4F8P98187 520 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 ENPEPQ07075 957 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 INCA1Q0VD86 236 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 NCAPHQ15003 741 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 DCAF17Q5H9S7 520 aaPredicted RBP7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 MDH1BQ5I0G3 518 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 LIN9Q5TKA1 542 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 TPGS2Q68CL5 300 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 CCDC149Q6ZUS6 474 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 INTS8Q75QN2 995 aaKnown RBP7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 GAREM2Q75VX8 874 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 GPRIN1Q7Z2K8 1008 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 ARHGEF19Q8IW93 802 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 TRIML1Q8N9V2 468 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 ZMIZ2Q8NF64 920 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 CACTINQ8WUQ7 758 aaKnown RBP7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 FGF14Q92915 247 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 CCDC47Q96A33 483 aaKnown RBP7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 PCED1BQ96HM7 432 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 DHTKD1Q96HY7 919 aaPredicted RBP7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 CNOT6LQ96LI5 555 aaKnown RBP7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 LRRC3BQ96PB8 259 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 ZSWIM1Q9BR11 485 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 B3GNT5Q9BYG0 378 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 NIF3L1Q9GZT8 377 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 TMEM8AQ9HCN3 771 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 AVENQ9NQS1 362 aaPredicted RBP7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 ABI2Q9NYB9 513 aaPredicted RBP7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 EPS15L1Q9UBC2 864 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 NXF1Q9UBU9 619 aaKnown RBP7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 GTF3C4Q9UKN8 822 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 COQ4Q9Y3A0 265 aa7.7□□□□□ -1.18
TOPBP1-207ENST00000509162 ANHXE9PGG2 379 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 CETN3O15182 167 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 HUS1O60921 280 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 CILPO75339 1184 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 BEST1O76090 585 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 NOL4O94818 638 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 PRAMEF12O95522 483 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 PDGFRBP09619 1106 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 EPB41P11171 864 aaKnown RBP7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 CCDC130P13994 396 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 ACO1P21399 889 aaKnown RBP7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 ATICP31939 592 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 CTHP32929 405 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms