RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 CYLC1P35663 651 aaPredicted RBP21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 GPD2P43304 727 aa21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 CFAP221Q4G0U5 840 aa21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 SMARCD1Q96GM5 515 aa21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 FUBP3Q96I24 572 aaKnown RBP eCLIP21.6■■□□□ 1.058e-7■□□□□ 9.2
CDC42SE2-206ENST00000503291 KRT82Q9NSB4 513 aa21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 NAGPAQ9UK23 515 aa21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 CEP83Q9Y592 693 aa21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 MYO7AQ13402 2215 aa21.59■■□□□ 1.05
CDC42SE2-206ENST00000503291 ARHGAP6O43182 974 aa21.59■■□□□ 1.05
CDC42SE2-206ENST00000503291 LPXNO60711 386 aa21.59■■□□□ 1.05
CDC42SE2-206ENST00000503291 NDUFA10O95299 355 aa21.59■■□□□ 1.05
CDC42SE2-206ENST00000503291 VNN2O95498 520 aa21.59■■□□□ 1.05
CDC42SE2-206ENST00000503291 FAM200BP0CF97 657 aa21.59■■□□□ 1.05
CDC42SE2-206ENST00000503291 UNGP13051 313 aaPredicted RBP21.59■■□□□ 1.05
CDC42SE2-206ENST00000503291 BCAT1P54687 386 aa21.59■■□□□ 1.05
CDC42SE2-206ENST00000503291 PDE4CQ08493 712 aa21.59■■□□□ 1.05
CDC42SE2-206ENST00000503291 ADCY1Q08828 1119 aa21.59■■□□□ 1.05
CDC42SE2-206ENST00000503291 TMEM35BQ8NCS4 154 aa21.59■■□□□ 1.05
CDC42SE2-206ENST00000503291 CPA5Q8WXQ8 436 aa21.59■■□□□ 1.05
CDC42SE2-206ENST00000503291 SECISBP2LQ93073 1101 aaKnown RBP21.59■■□□□ 1.05
CDC42SE2-206ENST00000503291 LMAN2LQ9H0V9 348 aa21.59■■□□□ 1.05
CDC42SE2-206ENST00000503291 TAS2R14Q9NYV8 317 aa21.59■■□□□ 1.05
CDC42SE2-206ENST00000503291 MYO9BQ13459 2157 aa21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 TMCO5BA8MYB1 307 aa21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 AP1G2O75843 785 aa21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 BEST1O76090 585 aa21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 LSM8O95777 96 aaKnown RBP21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 ADH1AP07327 375 aa21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 NPR3P17342 541 aa21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 CDH5P33151 784 aaPredicted RBP21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 CACNA2D1P54289 1103 aa21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 NOMO3P69849 1222 aa21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 BST2Q10589 180 aaKnown RBP21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 CLEC16AQ2KHT3 1053 aa21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 NAA35Q5VZE5 725 aa21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 TPGS2Q68CL5 300 aa21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 ALKBH5Q6P6C2 394 aaKnown RBP21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 C1orf131Q8NDD1 294 aaKnown RBP21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 SPPL2BQ8TCT7 592 aa21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 C2orf15Q8WU43 125 aaKnown RBP21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 SLC35F5Q8WV83 523 aa21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 KCNK16Q96T55 309 aa21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 TMEM30AQ9NV96 361 aa21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 AFF4Q9UHB7 1163 aaKnown RBP21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 ATP8B3O60423 1300 aa21.58■■□□□ 1.05
CDC42SE2-206ENST00000503291 ATF2P15336 505 aa21.58■■□□□ 1.04
CDC42SE2-206ENST00000503291 KLRC2P26717 231 aa21.58■■□□□ 1.04
CDC42SE2-206ENST00000503291 DUSP4Q13115 394 aa21.58■■□□□ 1.04
CDC42SE2-206ENST00000503291 CLEC20AQ6ZU45 233 aa21.58■■□□□ 1.04
CDC42SE2-206ENST00000503291 CRISPLD1Q9H336 500 aa21.58■■□□□ 1.04
CDC42SE2-206ENST00000503291 ABCB6Q9NP58 842 aa21.58■■□□□ 1.04
CDC42SE2-206ENST00000503291 SLC27A5Q9Y2P5 690 aa21.58■■□□□ 1.04
CDC42SE2-206ENST00000503291 EIF3CLB5ME19 914 aaKnown RBP21.57■■□□□ 1.04
CDC42SE2-206ENST00000503291 TULP2O00295 520 aa21.57■■□□□ 1.04
CDC42SE2-206ENST00000503291 ZNF263O14978 683 aa21.57■■□□□ 1.04
CDC42SE2-206ENST00000503291 GZMAP12544 262 aa21.57■■□□□ 1.04
CDC42SE2-206ENST00000503291 DEKP35659 375 aaKnown RBP21.57■■□□□ 1.04
CDC42SE2-206ENST00000503291 MAP3K7CLP57077 242 aa21.57■■□□□ 1.04
CDC42SE2-206ENST00000503291 SLC8A3P57103 927 aa21.57■■□□□ 1.04
CDC42SE2-206ENST00000503291 CCDC122Q5T0U0 273 aa21.57■■□□□ 1.04
CDC42SE2-206ENST00000503291 TTC9BQ8N6N2 239 aa21.57■■□□□ 1.04
CDC42SE2-206ENST00000503291 EIF3CQ99613 913 aaKnown RBP21.57■■□□□ 1.04
CDC42SE2-206ENST00000503291 SMOQ99835 787 aa21.57■■□□□ 1.04
CDC42SE2-206ENST00000503291 CSNK1G1Q9HCP0 422 aa21.57■■□□□ 1.04
CDC42SE2-206ENST00000503291 CYTH4Q9UIA0 394 aa21.57■■□□□ 1.04
CDC42SE2-206ENST00000503291 MYH10P35580 1976 aa21.57■■□□□ 1.04
CDC42SE2-206ENST00000503291 LCA5LO95447 670 aa21.56■■□□□ 1.04
CDC42SE2-206ENST00000503291 ACAD10Q6JQN1 1059 aa21.56■■□□□ 1.04
CDC42SE2-206ENST00000503291 DNAAF5Q86Y56 855 aa21.56■■□□□ 1.04
CDC42SE2-206ENST00000503291 ZMIZ2Q8NF64 920 aa21.56■■□□□ 1.04
CDC42SE2-206ENST00000503291 NENFQ9UMX5 172 aa21.56■■□□□ 1.04
CDC42SE2-206ENST00000503291 SETSIPP0DME0 302 aa21.56■■□□□ 1.04
CDC42SE2-206ENST00000503291 GRIK1P39086 918 aa21.56■■□□□ 1.04
CDC42SE2-206ENST00000503291 CENPCQ03188 943 aa21.56■■□□□ 1.04
CDC42SE2-206ENST00000503291 PMF1Q6P1K2 205 aa21.56■■□□□ 1.04
CDC42SE2-206ENST00000503291 VSTM1Q6UX27 236 aa21.56■■□□□ 1.04
CDC42SE2-206ENST00000503291 DMAP1Q9NPF5 467 aaPredicted RBP21.56■■□□□ 1.04
CDC42SE2-206ENST00000503291 PTPRDP23468 1912 aa21.56■■□□□ 1.04
CDC42SE2-206ENST00000503291 F8VP50 259 aa21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 XPO1O14980 1071 aaKnown RBP21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 TGM5O43548 720 aa21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 RTN2O75298 545 aa21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 SEC24AO95486 1093 aa21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 FTLP02792 175 aaPredicted RBP21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 MAGEA11P43364 429 aa21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 NSFP46459 744 aaKnown RBP21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 SPA17Q15506 151 aa21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 MGAT5BQ3V5L5 792 aa21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 LILRA6Q6PI73 481 aa21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 TOGARAM2Q6ZUX3 1019 aa21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 SCN4BQ8IWT1 228 aa21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 ISCUQ9H1K1 167 aa21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.55■■□□□ 1.042e-7■□□□□ 8.1
CDC42SE2-206ENST00000503291 SOX1O00570 391 aaPredicted RBP21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 IPO7O95373 1038 aaKnown RBP21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 SPATA31D3P0C874 917 aa21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 HAPLN1P10915 354 aaPredicted RBP21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 PLA2G4AP47712 749 aa21.55■■□□□ 1.04
CDC42SE2-206ENST00000503291 SPATA31D4Q6ZUB0 917 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms