RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CPLX1O14810 134 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 KLK10O43240 276 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 DYRK3O43781 588 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 TFRCP02786 760 aaKnown RBP6.65□□□□□ -1.34
BRCA1-224ENST00000497488 MT-ND3P03897 115 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 TUBB4AP04350 444 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 ANXA6P08133 673 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 CELA2BP08218 269 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-224ENST00000497488 QDPRP09417 244 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 FAM90A15PP0C7V4 464 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 FAM90A14PP0C7W9 464 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 MSL3P1P0C860 447 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 ATP5F1P24539 256 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-224ENST00000497488 KLRK1P26718 216 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 MST1P26927 711 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 PCSK1P29120 753 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 EPHA8P29322 1005 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-224ENST00000497488 GUCY1A2P33402 732 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 PAFAH1B1P43034 410 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 PHKA1P46020 1223 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 CTCFP49711 727 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-224ENST00000497488 PDE6CP51160 858 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 RPS3AP61247 264 aaKnown RBP6.65□□□□□ -1.34
BRCA1-224ENST00000497488 RPP30P78346 268 aaKnown RBP6.65□□□□□ -1.34
BRCA1-224ENST00000497488 POU6F2P78424 691 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-224ENST00000497488 MVKQ03426 396 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 UBXN1Q04323 297 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 SLC29A2Q14542 456 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 MMEL1Q495T6 779 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 CYP27C1Q4G0S4 372 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 FAM69AQ5T7M9 428 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 FAXCQ5TGI0 409 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 INO80CQ6PI98 192 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-224ENST00000497488 SYT13Q7L8C5 426 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 SLFN11Q7Z7L1 901 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 NBPF11Q86T75 865 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 FAM20CQ8IXL6 584 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 SVOPQ8N4V2 548 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 ZNF480Q8WV37 535 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 OR10A5Q9H207 317 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 SEMA3GQ9NS98 782 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 TAS2R10Q9NYW0 307 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 TRPS1Q9UHF7 1281 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 LYVE1Q9Y5Y7 322 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 U3KQE9 123 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 GRIN2AQ12879 1464 aa6.65□□□□□ -1.35
BRCA1-224ENST00000497488 ERICH3Q5RHP9 1530 aa6.65□□□□□ -1.35
BRCA1-224ENST00000497488 RUSC2Q8N2Y8 1516 aa6.65□□□□□ -1.35
BRCA1-224ENST00000497488 A0A1W2PQ27 194 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 A0A1W2PQ64 194 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 A0A1W2PQC6 194 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 A0A1W2PQD8 194 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 UNC5CO95185 931 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 GLI4P10075 376 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 HOXB4P17483 251 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-224ENST00000497488 GGT5P36269 586 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 HNF4AP41235 474 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 CLCN7P51798 805 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 OXCT1P55809 520 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 UCP3P55916 312 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 RBP5P82980 135 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 BFSP1Q12934 665 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 PRPF4BQ13523 1007 aaKnown RBP6.64□□□□□ -1.35
BRCA1-224ENST00000497488 KYNUQ16719 465 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 DGKDQ16760 1214 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 PLAG1Q6DJT9 500 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 ISM2Q6H9L7 571 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 ZDHHC24Q6UX98 284 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 CABP7Q86V35 215 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 RASGRP3Q8IV61 690 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 NUP93Q8N1F7 819 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 NETO2Q8NC67 525 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 NFKBIDQ8NI38 313 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 METTL6Q8TCB7 284 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 UTP4Q969X6 686 aaKnown RBP6.64□□□□□ -1.35
BRCA1-224ENST00000497488 DYDC2Q96IM9 177 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 PI4K2AQ9BTU6 479 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 BTBD2Q9BX70 525 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 BRD8Q9H0E9 1235 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 NELFAQ9H3P2 528 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 ERVMER34-1Q9H9K5 563 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 TMEM140Q9NV12 185 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 NDUFAF4Q9P032 175 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 KCND3Q9UK17 655 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 FHAD1B1AJZ9 1412 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 CEP170Q5SW79 1584 aa6.64□□□□□ -1.35
BRCA1-224ENST00000497488 TRIM64CA6NLI5 447 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 FAM229AH3BQW9 127 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 INO80B-WBP1J3KQ70 363 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 N4BP3O15049 544 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 ADCY6O43306 1168 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 PPP6R2O75170 966 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 DNAJB5O75953 348 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 PLATP00750 562 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 GNAI3P08754 354 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 THEGLP0DJG4 465 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 UBL4AP11441 157 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 PFKLP17858 780 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 AKT1P31749 480 aa6.63□□□□□ -1.35
BRCA1-224ENST00000497488 HPDP32754 393 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms