RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 CD72P21854 359 aa16.78■□□□□ 0.28
HDAC4-213ENST00000496347 NR2F2P24468 414 aa16.78■□□□□ 0.28
HDAC4-213ENST00000496347 RPL13P26373 211 aaKnown RBP16.78■□□□□ 0.28
HDAC4-213ENST00000496347 ANXA13P27216 316 aa16.78■□□□□ 0.28
HDAC4-213ENST00000496347 CYP27A1Q02318 531 aa16.78■□□□□ 0.28
HDAC4-213ENST00000496347 ZNF268Q14587 947 aaPredicted RBP16.78■□□□□ 0.28
HDAC4-213ENST00000496347 ZNF667Q5HYK9 610 aa16.78■□□□□ 0.28
HDAC4-213ENST00000496347 SDHAF4Q5VUM1 108 aa16.78■□□□□ 0.28
HDAC4-213ENST00000496347 INTS8Q75QN2 995 aaKnown RBP16.78■□□□□ 0.28
HDAC4-213ENST00000496347 FRMD5Q7Z6J6 570 aa16.78■□□□□ 0.28
HDAC4-213ENST00000496347 MON1AQ86VX9 555 aa16.78■□□□□ 0.28
HDAC4-213ENST00000496347 FMR1NBQ8N0W7 255 aaPredicted RBP16.78■□□□□ 0.28
HDAC4-213ENST00000496347 ZNF687Q8N1G0 1237 aa16.78■□□□□ 0.28
HDAC4-213ENST00000496347 B3GALNT2Q8NCR0 500 aa16.78■□□□□ 0.28
HDAC4-213ENST00000496347 OR6B3Q8NGW1 331 aa16.78■□□□□ 0.28
HDAC4-213ENST00000496347 SLC46A2Q9BY10 475 aa16.78■□□□□ 0.28
HDAC4-213ENST00000496347 C8orf33Q9H7E9 229 aaPredicted RBP16.78■□□□□ 0.28
HDAC4-213ENST00000496347 RMND1Q9NWS8 449 aa16.78■□□□□ 0.28
HDAC4-213ENST00000496347 MAGEC2Q9UBF1 373 aaPredicted RBP16.78■□□□□ 0.28
HDAC4-213ENST00000496347 NXF1Q9UBU9 619 aaKnown RBP16.78■□□□□ 0.28
HDAC4-213ENST00000496347 MTF2Q9Y483 593 aaPredicted RBP16.78■□□□□ 0.28
HDAC4-213ENST00000496347 LRRN2O75325 713 aa16.77■□□□□ 0.28
HDAC4-213ENST00000496347 CLSTN1O94985 981 aa16.77■□□□□ 0.28
HDAC4-213ENST00000496347 C4BPAP04003 597 aaKnown RBP16.77■□□□□ 0.28
HDAC4-213ENST00000496347 PDGFRBP09619 1106 aa16.77■□□□□ 0.28
HDAC4-213ENST00000496347 BDNFP23560 247 aa16.77■□□□□ 0.28
HDAC4-213ENST00000496347 PDE6CP51160 858 aa16.77■□□□□ 0.28
HDAC4-213ENST00000496347 FAM160A1Q05DH4 1040 aa16.77■□□□□ 0.28
HDAC4-213ENST00000496347 EDRF1Q3B7T1 1238 aa16.77■□□□□ 0.28
HDAC4-213ENST00000496347 ZNF528Q3MIS6 628 aa16.77■□□□□ 0.28
HDAC4-213ENST00000496347 ZCWPW2Q504Y3 356 aa16.77■□□□□ 0.28
HDAC4-213ENST00000496347 MDH1BQ5I0G3 518 aa16.77■□□□□ 0.28
HDAC4-213ENST00000496347 SCN4BQ8IWT1 228 aa16.77■□□□□ 0.28
HDAC4-213ENST00000496347 MAB21L3Q8N8X9 362 aa16.77■□□□□ 0.28
HDAC4-213ENST00000496347 STKLD1Q8NE28 680 aa16.77■□□□□ 0.28
HDAC4-213ENST00000496347 FAM3CQ92520 227 aa16.77■□□□□ 0.28
HDAC4-213ENST00000496347 TAF4BQ92750 862 aa16.77■□□□□ 0.28
HDAC4-213ENST00000496347 NKD2Q969F2 451 aaPredicted RBP16.77■□□□□ 0.28
HDAC4-213ENST00000496347 SMYD3Q9H7B4 428 aa16.77■□□□□ 0.28
HDAC4-213ENST00000496347 SPATA6Q9NWH7 488 aaPredicted RBP16.77■□□□□ 0.28
HDAC4-213ENST00000496347 THG1LQ9NWX6 298 aaKnown RBP16.77■□□□□ 0.28
HDAC4-213ENST00000496347 FBXO4Q9UKT5 387 aa16.77■□□□□ 0.28
HDAC4-213ENST00000496347 NME7Q9Y5B8 376 aa16.77■□□□□ 0.28
HDAC4-213ENST00000496347 SPTBN4Q9H254 2564 aa16.77■□□□□ 0.27
HDAC4-213ENST00000496347 ATP8B3O60423 1300 aa16.76■□□□□ 0.27
HDAC4-213ENST00000496347 PRR23AA6NEV1 266 aa16.76■□□□□ 0.27
HDAC4-213ENST00000496347 A8MXQ7 604 aa16.76■□□□□ 0.27
HDAC4-213ENST00000496347 PFKLP17858 780 aa16.76■□□□□ 0.27
HDAC4-213ENST00000496347 CTHP32929 405 aa16.76■□□□□ 0.27
HDAC4-213ENST00000496347 GRIK1P39086 918 aa16.76■□□□□ 0.27
HDAC4-213ENST00000496347 PIK3CAP42336 1068 aa16.76■□□□□ 0.27
HDAC4-213ENST00000496347 NOP14P78316 857 aaKnown RBP16.76■□□□□ 0.27
HDAC4-213ENST00000496347 DLG4P78352 724 aa16.76■□□□□ 0.27
HDAC4-213ENST00000496347 DENND5BQ6ZUT9 1274 aa16.76■□□□□ 0.27
HDAC4-213ENST00000496347 RALGPS2Q86X27 583 aaPredicted RBP16.76■□□□□ 0.27
HDAC4-213ENST00000496347 USP13Q92995 863 aaPredicted RBP16.76■□□□□ 0.27
HDAC4-213ENST00000496347 TNIP3Q96KP6 325 aa16.76■□□□□ 0.27
HDAC4-213ENST00000496347 C8orf48Q96LL4 319 aa16.76■□□□□ 0.27
HDAC4-213ENST00000496347 LRRC3BQ96PB8 259 aa16.76■□□□□ 0.27
HDAC4-213ENST00000496347 TTLL2Q9BWV7 592 aa16.76■□□□□ 0.27
HDAC4-213ENST00000496347 GTPBP4Q9BZE4 634 aaKnown RBP16.76■□□□□ 0.27
HDAC4-213ENST00000496347 IMPG2Q9BZV3 1241 aa16.76■□□□□ 0.27
HDAC4-213ENST00000496347 CHRDQ9H2X0 955 aa16.76■□□□□ 0.27
HDAC4-213ENST00000496347 SEMA4AQ9H3S1 761 aa16.76■□□□□ 0.27
HDAC4-213ENST00000496347 PRMT8Q9NR22 394 aaPredicted RBP16.76■□□□□ 0.27
HDAC4-213ENST00000496347 TDP1Q9NUW8 608 aa16.76■□□□□ 0.27
HDAC4-213ENST00000496347 MYH10P35580 1976 aa16.76■□□□□ 0.27
HDAC4-213ENST00000496347 TRAV19A0A0A6YYK7 116 aa16.75■□□□□ 0.27
HDAC4-213ENST00000496347 LAMTOR5O43504 91 aa16.75■□□□□ 0.27
HDAC4-213ENST00000496347 AKAP3O75969 853 aa16.75■□□□□ 0.27
HDAC4-213ENST00000496347 VNN1O95497 513 aa16.75■□□□□ 0.27
HDAC4-213ENST00000496347 ASS1P00966 412 aaKnown RBP16.75■□□□□ 0.27
HDAC4-213ENST00000496347 SP9P0CG40 484 aa16.75■□□□□ 0.27
HDAC4-213ENST00000496347 KRT13P13646 458 aa16.75■□□□□ 0.27
HDAC4-213ENST00000496347 PTPN1P18031 435 aaKnown RBP16.75■□□□□ 0.27
HDAC4-213ENST00000496347 VAMP7P51809 220 aa16.75■□□□□ 0.27
HDAC4-213ENST00000496347 KPNA1P52294 538 aaPredicted RBP16.75■□□□□ 0.27
HDAC4-213ENST00000496347 SGSM1Q2NKQ1 1148 aa16.75■□□□□ 0.27
HDAC4-213ENST00000496347 COBLL1Q53SF7 1204 aa16.75■□□□□ 0.27
HDAC4-213ENST00000496347 TXNDC8Q6A555 127 aa16.75■□□□□ 0.27
HDAC4-213ENST00000496347 SCARA5Q6ZMJ2 495 aa16.75■□□□□ 0.27
HDAC4-213ENST00000496347 SV2AQ7L0J3 742 aa16.75■□□□□ 0.27
HDAC4-213ENST00000496347 FAM186BQ8IYM0 893 aa16.75■□□□□ 0.27
HDAC4-213ENST00000496347 GSDMAQ96QA5 445 aa16.75■□□□□ 0.27
HDAC4-213ENST00000496347 SMG9Q9H0W8 520 aaKnown RBP16.75■□□□□ 0.27
HDAC4-213ENST00000496347 DPEP3Q9H4B8 488 aa16.75■□□□□ 0.27
HDAC4-213ENST00000496347 HOOK1Q9UJC3 728 aaKnown RBP16.75■□□□□ 0.27
HDAC4-213ENST00000496347 NDRG2Q9UN36 371 aaKnown RBP16.75■□□□□ 0.27
HDAC4-213ENST00000496347 MAPK8IP1Q9UQF2 711 aa16.75■□□□□ 0.27
HDAC4-213ENST00000496347 CCL26Q9Y258 94 aa16.75■□□□□ 0.27
HDAC4-213ENST00000496347 GPR179Q6PRD1 2367 aa16.75■□□□□ 0.27
HDAC4-213ENST00000496347 MYO16Q9Y6X6 1858 aa16.74■□□□□ 0.27
HDAC4-213ENST00000496347 F8VP50 259 aa16.74■□□□□ 0.27
HDAC4-213ENST00000496347 SPECC1L-ADORA2AF8WAN1 911 aa16.74■□□□□ 0.27
HDAC4-213ENST00000496347 SMC2O95347 1197 aa16.74■□□□□ 0.27
HDAC4-213ENST00000496347 CKMP06732 381 aa16.74■□□□□ 0.27
HDAC4-213ENST00000496347 PSMC2P35998 433 aaKnown RBP16.74■□□□□ 0.27
HDAC4-213ENST00000496347 PPP3CCP48454 512 aa16.74■□□□□ 0.27
HDAC4-213ENST00000496347 USP4Q13107 963 aa16.74■□□□□ 0.27
HDAC4-213ENST00000496347 FZD5Q13467 585 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms