RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 ETAA1Q9NY74 926 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 HESX1Q9UBX0 185 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 ZNF212Q9UDV6 495 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 MAN2B2Q9Y2E5 1009 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 CCDC189A1A4V9 331 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 PIPSLA2A3N6 862 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 GRID2IPA4D2P6 1211 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 FOXN1O15353 648 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 RAMP2O60895 175 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 SKAP2O75563 359 aaPredicted RBP6.95□□□□□ -1.3
CCDC39-207ENST00000495817 SPDEFO95238 335 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 KRT4P19013 534 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 CHKAP35790 457 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 ZEB1P37275 1124 aaPredicted RBP6.95□□□□□ -1.3
CCDC39-207ENST00000495817 ZNF844Q08AG5 666 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 FSTL1Q12841 308 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 LAIR1Q6GTX8 287 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 KRT28Q7Z3Y7 464 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 SMAP1Q8IYB5 467 aaPredicted RBP6.95□□□□□ -1.3
CCDC39-207ENST00000495817 ZNF384Q8TF68 577 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 CCT6BQ92526 530 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 RNF31Q96EP0 1072 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 SCLT1Q96NL6 688 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 TLR10Q9BXR5 811 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 CYP4F11Q9HBI6 524 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 LUZP4Q9P127 313 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 ANKFY1Q9P2R3 1169 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 CAPN11Q9UMQ6 739 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 MAP3K2Q9Y2U5 619 aa6.95□□□□□ -1.3
CCDC39-207ENST00000495817 MTO1Q9Y2Z2 717 aaKnown RBP6.95□□□□□ -1.3
CCDC39-207ENST00000495817 A0A087X1B8 175 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 POLRMTO00411 1230 aaKnown RBP6.94□□□□□ -1.3
CCDC39-207ENST00000495817 CCP110O43303 1012 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 RASSF9O75901 435 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 CSTBP04080 98 aaKnown RBP6.94□□□□□ -1.3
CCDC39-207ENST00000495817 A1BGP04217 495 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 FCER1AP12319 257 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 BTF3P20290 206 aaKnown RBP6.94□□□□□ -1.3
CCDC39-207ENST00000495817 IQCB1Q15051 598 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 ELF2Q15723 593 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 CCDC38Q502W7 563 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 Q6YL49 198 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 COLGALT2Q8IYK4 626 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 CPXCR1Q8N123 301 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 LCORLQ8N3X6 602 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 CHFRQ96EP1 664 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 MARS2Q96GW9 593 aaKnown RBP6.94□□□□□ -1.3
CCDC39-207ENST00000495817 MESP1Q9BRJ9 268 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 ISCA1Q9BUE6 129 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 MAGEB5Q9BZ81 275 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 WDR11Q9BZH6 1224 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 TOR3AQ9H497 397 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 NECTIN3Q9NQS3 549 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 ZSCAN32Q9NX65 697 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 MID2Q9UJV3 735 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 SLC39A10Q9ULF5 831 aa6.94□□□□□ -1.3
CCDC39-207ENST00000495817 LOC102723971A0A1B0GUV8 181 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 UNC119BA6NIH7 251 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 KCNQ3O43525 872 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 TLR5O60602 858 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 ERN1O75460 977 aaKnown RBP6.93□□□□□ -1.3
CCDC39-207ENST00000495817 SOAT2O75908 522 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 HKR1P10072 659 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 EGR2P11161 476 aaPredicted RBP6.93□□□□□ -1.3
CCDC39-207ENST00000495817 ACVR2AP27037 513 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 PDIA3P30101 505 aaKnown RBP6.93□□□□□ -1.3
CCDC39-207ENST00000495817 PPM1FP49593 454 aaPredicted RBP6.93□□□□□ -1.3
CCDC39-207ENST00000495817 COPAP53621 1224 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 GRM1Q13255 1194 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 TP53BP2Q13625 1128 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 SLC29A2Q14542 456 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 CYP2A13Q16696 494 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 INSCQ1MX18 579 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 USP17L6PQ6QN14 398 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 PCSK4Q6UW60 755 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 CCDC150Q8NCX0 1101 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 TRIB1Q96RU8 372 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 PPP1R9BQ96SB3 815 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 HEPHQ9BQS7 1158 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 TTPALQ9BTX7 342 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.93□□□□□ -1.3
CCDC39-207ENST00000495817 HSFX1Q9UBD0 423 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 PACSIN3Q9UKS6 424 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 HDAC9Q9UKV0 1011 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 CDYLQ9Y232 598 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 AATKQ6ZMQ8 1374 aa6.93□□□□□ -1.3
CCDC39-207ENST00000495817 CCDC195A0A1B0GUA6 201 aa6.92□□□□□ -1.3
CCDC39-207ENST00000495817 A0A1W2PS29 197 aa6.92□□□□□ -1.3
CCDC39-207ENST00000495817 ATXN1LP0C7T5 689 aaKnown RBP6.92□□□□□ -1.3
CCDC39-207ENST00000495817 CCT5P48643 541 aa6.92□□□□□ -1.3
CCDC39-207ENST00000495817 TOB1P50616 345 aaPredicted RBP6.92□□□□□ -1.3
CCDC39-207ENST00000495817 VAV2P52735 878 aa6.92□□□□□ -1.3
CCDC39-207ENST00000495817 SATB1Q01826 763 aa6.92□□□□□ -1.3
CCDC39-207ENST00000495817 ZACNQ401N2 412 aa6.92□□□□□ -1.3
CCDC39-207ENST00000495817 TAPT1Q6NXT6 567 aa6.92□□□□□ -1.3
CCDC39-207ENST00000495817 ZNF354CQ86Y25 554 aa6.92□□□□□ -1.3
CCDC39-207ENST00000495817 VRK3Q8IV63 474 aa6.92□□□□□ -1.3
CCDC39-207ENST00000495817 SUPT20HQ8NEM7 779 aa6.92□□□□□ -1.3
CCDC39-207ENST00000495817 POC1BQ8TC44 478 aa6.92□□□□□ -1.3
CCDC39-207ENST00000495817 MUL1Q969V5 352 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms