RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 MMP17Q9ULZ9 603 aa16.48■□□□□ 0.23
SCAMP3-208ENST00000490999 L1RE1Q9UN81 338 aa16.48■□□□□ 0.23
SCAMP3-208ENST00000490999 NUP205Q92621 2012 aa16.48■□□□□ 0.23
SCAMP3-208ENST00000490999 SOBPA7XYQ1 873 aa16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 KLF8O95600 359 aaPredicted RBP16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 CFIP05156 583 aa16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 PAX3P23760 479 aa16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 POLR2BP30876 1174 aaKnown RBP16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 FAM193AP78312 1265 aa16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 LMAN2Q12907 356 aa16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 NFE2Q16621 373 aaPredicted RBP16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 SV2CQ496J9 727 aa16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 INTS6LQ5JSJ4 861 aaKnown RBP16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 ADALQ6DHV7 355 aa16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 LPCAT2Q7L5N7 544 aa16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 OSTM1Q86WC4 334 aa16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 SCN4BQ8IWT1 228 aa16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 TXNDC5Q8NBS9 432 aaKnown RBP16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 OR2I1PQ8NGU4 316 aa16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 OLIG1Q8TAK6 271 aa16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 TRMT2BQ96GJ1 504 aaKnown RBP16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 ZNF560Q96MR9 790 aa16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 LLPHQ9BRT6 129 aaKnown RBP16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 GTPBP2Q9BX10 602 aaKnown RBP16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 NUSAP1Q9BXS6 441 aaKnown RBP16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 SLC32A1Q9H598 525 aa16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 ASB7Q9H672 318 aa16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 DDX43Q9NXZ2 648 aaKnown RBP16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 GCNT4Q9P109 453 aa16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 BCCIPQ9P287 314 aaKnown RBP eCLIP16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 UXTQ9UBK9 157 aaPredicted RBP16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 EVLQ9UI08 416 aaPredicted RBP16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 MBD1Q9UIS9 605 aaPredicted RBP16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 ODF2LQ9ULJ1 636 aa16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 MYH11P35749 1972 aa16.47■□□□□ 0.23
SCAMP3-208ENST00000490999 SGK1O00141 431 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 TAF4O00268 1085 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 MAP3K13O43283 966 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 NFATC1O95644 943 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 CYP17A1P05093 508 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 TIE1P35590 1138 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 P2RY2P41231 377 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 RPL10AP62906 217 aaKnown RBP16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 ZXDBP98169 803 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 ATP2C1P98194 919 aaPredicted RBP16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 KDSRQ06136 332 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 LYSMD4Q5XG99 296 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 C19orf48Q6RUI8 117 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 C12orf40Q86WS4 652 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 DEFB119Q8N690 84 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 LEO1Q8WVC0 666 aaPredicted RBP16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 HMGB4Q8WW32 186 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 SPACA7Q96KW9 195 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 FIZ1Q96SL8 496 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 PKMYT1Q99640 499 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 PARVGQ9HBI0 331 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 GTF3C4Q9UKN8 822 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 AGO2Q9UKV8 859 aaKnown RBP16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 LIMCH1Q9UPQ0 1083 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 MSRB2Q9Y3D2 182 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 DENND4CQ5VZ89 1909 aa16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 ASCC3Q8N3C0 2202 aaKnown RBP16.46■□□□□ 0.23
SCAMP3-208ENST00000490999 THADAQ6YHU6 1953 aa16.46■□□□□ 0.22
SCAMP3-208ENST00000490999 TRAK2O60296 914 aa16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 ITGB3P05106 788 aa16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 KRT18P05783 430 aaKnown RBP16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 CHRM1P11229 460 aaPredicted RBP16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 ITPKAP23677 461 aa16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 SLC6A11P48066 632 aa16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 ZNF131P52739 623 aa16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 HMGN5P82970 282 aaKnown RBP16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 TFAMQ00059 246 aaKnown RBP16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 NR1H3Q13133 447 aa16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 FILIP1Q7Z7B0 1213 aa16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 PIP4P1Q86T03 277 aa16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 SYT12Q8IV01 421 aa16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 CHCHD4Q8N4Q1 142 aa16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 IL17RCQ8NAC3 791 aa16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 ZSWIM2Q8NEG5 633 aa16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 WHAMMQ8TF30 809 aa16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 KCNN1Q92952 543 aa16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 MYRFLQ96LU7 910 aa16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 ARHGAP26Q9UNA1 814 aa16.45■□□□□ 0.22
SCAMP3-208ENST00000490999 ZNF638Q14966 1978 aaKnown RBP16.44■□□□□ 0.22
SCAMP3-208ENST00000490999 TCRBV21S2A2A0A5A6 115 aa16.44■□□□□ 0.22
SCAMP3-208ENST00000490999 LEFTY2O00292 366 aa16.44■□□□□ 0.22
SCAMP3-208ENST00000490999 TNFRSF10BO14763 440 aa16.44■□□□□ 0.22
SCAMP3-208ENST00000490999 TBCAO75347 108 aaKnown RBP16.44■□□□□ 0.22
SCAMP3-208ENST00000490999 ALDH1A2O94788 518 aa16.44■□□□□ 0.22
SCAMP3-208ENST00000490999 PSMC1P62191 440 aaKnown RBP16.44■□□□□ 0.22
SCAMP3-208ENST00000490999 MCM6Q14566 821 aa16.44■□□□□ 0.22
SCAMP3-208ENST00000490999 EMC10Q5UCC4 262 aa16.44■□□□□ 0.22
SCAMP3-208ENST00000490999 CRELD2Q6UXH1 353 aaPredicted RBP16.44■□□□□ 0.22
SCAMP3-208ENST00000490999 SPATA2LQ8IUW3 424 aaPredicted RBP16.44■□□□□ 0.22
SCAMP3-208ENST00000490999 ABCB6Q9NP58 842 aa16.44■□□□□ 0.22
SCAMP3-208ENST00000490999 SMPD4Q9NXE4 827 aa16.44■□□□□ 0.22
SCAMP3-208ENST00000490999 AGAP1Q9UPQ3 857 aa16.44■□□□□ 0.22
SCAMP3-208ENST00000490999 TCHHQ07283 1943 aa16.44■□□□□ 0.22
SCAMP3-208ENST00000490999 HDCP19113 662 aa16.43■□□□□ 0.22
SCAMP3-208ENST00000490999 ATXN3P54252 364 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms