RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ELOVL4Q9GZR5 314 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 SMYD3Q9H7B4 428 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 C8orf33Q9H7E9 229 aaPredicted RBP18.61■□□□□ 0.57
SEC13-218ENST00000490283 TRPC7Q9HCX4 862 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 DLGAP2Q9P1A6 1054 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 NDRG2Q9UN36 371 aaKnown RBP18.61■□□□□ 0.57
SEC13-218ENST00000490283 TARSP26639 723 aaKnown RBP18.6■□□□□ 0.57
SEC13-218ENST00000490283 ENPEPQ07075 957 aa18.6■□□□□ 0.57
SEC13-218ENST00000490283 EDRF1Q3B7T1 1238 aa18.6■□□□□ 0.57
SEC13-218ENST00000490283 TXNDC8Q6A555 127 aa18.6■□□□□ 0.57
SEC13-218ENST00000490283 DENND5BQ6ZUT9 1274 aa18.6■□□□□ 0.57
SEC13-218ENST00000490283 SV2AQ7L0J3 742 aa18.6■□□□□ 0.57
SEC13-218ENST00000490283 MON1AQ86VX9 555 aa18.6■□□□□ 0.57
SEC13-218ENST00000490283 B3GALNT2Q8NCR0 500 aa18.6■□□□□ 0.57
SEC13-218ENST00000490283 FAM3CQ92520 227 aa18.6■□□□□ 0.57
SEC13-218ENST00000490283 RSPRY1Q96DX4 576 aa18.6■□□□□ 0.57
SEC13-218ENST00000490283 SPATA6Q9NWH7 488 aaPredicted RBP18.6■□□□□ 0.57
SEC13-218ENST00000490283 PIEZO1Q92508 2521 aa18.6■□□□□ 0.57
SEC13-218ENST00000490283 CACNA1HO95180 2353 aa18.6■□□□□ 0.57
SEC13-218ENST00000490283 NCANO14594 1321 aa18.59■□□□□ 0.57
SEC13-218ENST00000490283 LAMTOR5O43504 91 aa18.59■□□□□ 0.57
SEC13-218ENST00000490283 KINO60870 393 aaKnown RBP18.59■□□□□ 0.57
SEC13-218ENST00000490283 LRRN2O75325 713 aa18.59■□□□□ 0.57
SEC13-218ENST00000490283 AKAP3O75969 853 aa18.59■□□□□ 0.57
SEC13-218ENST00000490283 VNN1O95497 513 aa18.59■□□□□ 0.57
SEC13-218ENST00000490283 EPB41P11171 864 aaKnown RBP18.59■□□□□ 0.57
SEC13-218ENST00000490283 NBL1P41271 181 aa18.59■□□□□ 0.57
SEC13-218ENST00000490283 PDE6CP51160 858 aa18.59■□□□□ 0.57
SEC13-218ENST00000490283 MLLT6P55198 1093 aaPredicted RBP18.59■□□□□ 0.57
SEC13-218ENST00000490283 ZNF658Q5TYW1 1059 aaPredicted RBP18.59■□□□□ 0.57
SEC13-218ENST00000490283 CC2D1AQ6P1N0 951 aaPredicted RBP18.59■□□□□ 0.57
SEC13-218ENST00000490283 ZC3H14Q6PJT7 736 aaKnown RBP18.59■□□□□ 0.57
SEC13-218ENST00000490283 TMEM150AQ86TG1 271 aa18.59■□□□□ 0.57
SEC13-218ENST00000490283 SMYD4Q8IYR2 804 aaPredicted RBP18.59■□□□□ 0.57
SEC13-218ENST00000490283 TIGD1Q96MW7 591 aa18.59■□□□□ 0.57
SEC13-218ENST00000490283 MED10Q9BTT4 135 aa18.59■□□□□ 0.57
SEC13-218ENST00000490283 DNAI2Q9GZS0 605 aa18.59■□□□□ 0.57
SEC13-218ENST00000490283 SMG9Q9H0W8 520 aaKnown RBP18.59■□□□□ 0.57
SEC13-218ENST00000490283 TDP1Q9NUW8 608 aa18.59■□□□□ 0.57
SEC13-218ENST00000490283 MTF2Q9Y483 593 aaPredicted RBP18.59■□□□□ 0.57
SEC13-218ENST00000490283 TRAV19A0A0A6YYK7 116 aa18.58■□□□□ 0.56
SEC13-218ENST00000490283 CETN3O15182 167 aa18.58■□□□□ 0.56
SEC13-218ENST00000490283 STX10O60499 249 aa18.58■□□□□ 0.56
SEC13-218ENST00000490283 HLA-DRAP01903 254 aa18.58■□□□□ 0.56
SEC13-218ENST00000490283 CKMP06732 381 aa18.58■□□□□ 0.56
SEC13-218ENST00000490283 USP17L7P0C7H9 530 aa18.58■□□□□ 0.56
SEC13-218ENST00000490283 RPS9P46781 194 aaKnown RBP18.58■□□□□ 0.56
SEC13-218ENST00000490283 RAP1GAPP47736 663 aa18.58■□□□□ 0.56
SEC13-218ENST00000490283 STIM1Q13586 685 aa18.58■□□□□ 0.56
SEC13-218ENST00000490283 ENGASEQ8NFI3 743 aa18.58■□□□□ 0.56
SEC13-218ENST00000490283 CLDN23Q96B33 292 aa18.58■□□□□ 0.56
SEC13-218ENST00000490283 C8orf48Q96LL4 319 aa18.58■□□□□ 0.56
SEC13-218ENST00000490283 DPEP3Q9H4B8 488 aa18.58■□□□□ 0.56
SEC13-218ENST00000490283 MMRN2Q9H8L6 949 aa18.58■□□□□ 0.56
SEC13-218ENST00000490283 TRPM5Q9NZQ8 1165 aa18.58■□□□□ 0.56
SEC13-218ENST00000490283 CIZ1Q9ULV3 898 aaPredicted RBP18.58■□□□□ 0.56
SEC13-218ENST00000490283 PROB1E7EW31 1015 aa18.57■□□□□ 0.56
SEC13-218ENST00000490283 F8VP50 259 aa18.57■□□□□ 0.56
SEC13-218ENST00000490283 ARNTLO00327 626 aa18.57■□□□□ 0.56
SEC13-218ENST00000490283 GFRA3O60609 400 aa18.57■□□□□ 0.56
SEC13-218ENST00000490283 ASS1P00966 412 aaKnown RBP18.57■□□□□ 0.56
SEC13-218ENST00000490283 TRIM49P0CI25 452 aa18.57■□□□□ 0.56
SEC13-218ENST00000490283 TRIM49CP0CI26 452 aa18.57■□□□□ 0.56
SEC13-218ENST00000490283 CCNE1P24864 410 aa18.57■□□□□ 0.56
SEC13-218ENST00000490283 PPP3CCP48454 512 aa18.57■□□□□ 0.56
SEC13-218ENST00000490283 GCLMP48507 274 aa18.57■□□□□ 0.56
SEC13-218ENST00000490283 CDH8P55286 799 aa18.57■□□□□ 0.56
SEC13-218ENST00000490283 ZNF268Q14587 947 aaPredicted RBP18.57■□□□□ 0.56
SEC13-218ENST00000490283 ZCWPW2Q504Y3 356 aa18.57■□□□□ 0.56
SEC13-218ENST00000490283 FRMD5Q7Z6J6 570 aa18.57■□□□□ 0.56
SEC13-218ENST00000490283 RALGPS2Q86X27 583 aaPredicted RBP18.57■□□□□ 0.56
SEC13-218ENST00000490283 USP13Q92995 863 aaPredicted RBP18.57■□□□□ 0.56
SEC13-218ENST00000490283 NKD2Q969F2 451 aaPredicted RBP18.57■□□□□ 0.56
SEC13-218ENST00000490283 ZFYVE19Q96K21 471 aa18.57■□□□□ 0.56
SEC13-218ENST00000490283 IER2Q9BTL4 223 aa18.57■□□□□ 0.56
SEC13-218ENST00000490283 ZNF518BQ9C0D4 1074 aa18.57■□□□□ 0.56
SEC13-218ENST00000490283 TADA3O75528 432 aa18.56■□□□□ 0.56
SEC13-218ENST00000490283 GTF2H1P32780 548 aa18.56■□□□□ 0.56
SEC13-218ENST00000490283 PRCPP42785 496 aa18.56■□□□□ 0.56
SEC13-218ENST00000490283 NOP14P78316 857 aaKnown RBP18.56■□□□□ 0.56
SEC13-218ENST00000490283 LRRC32Q14392 662 aa18.56■□□□□ 0.56
SEC13-218ENST00000490283 ITPRIPL2Q3MIP1 535 aa18.56■□□□□ 0.56
SEC13-218ENST00000490283 COBLL1Q53SF7 1204 aa18.56■□□□□ 0.56
SEC13-218ENST00000490283 UNC93AQ86WB7 457 aa18.56■□□□□ 0.56
SEC13-218ENST00000490283 TTC16Q8NEE8 873 aa18.56■□□□□ 0.56
SEC13-218ENST00000490283 LRRC3BQ96PB8 259 aa18.56■□□□□ 0.56
SEC13-218ENST00000490283 SLITRK1Q96PX8 696 aa18.56■□□□□ 0.56
SEC13-218ENST00000490283 B3GNT5Q9BYG0 378 aa18.56■□□□□ 0.56
SEC13-218ENST00000490283 TMEM8AQ9HCN3 771 aa18.56■□□□□ 0.56
SEC13-218ENST00000490283 NME7Q9Y5B8 376 aa18.56■□□□□ 0.56
SEC13-218ENST00000490283 PCDHA5Q9Y5H7 936 aa18.56■□□□□ 0.56
SEC13-218ENST00000490283 WDFY4Q6ZS81 3184 aa18.55■□□□□ 0.56
SEC13-218ENST00000490283 SPECC1L-ADORA2AF8WAN1 911 aa18.55■□□□□ 0.56
SEC13-218ENST00000490283 CLDN5O00501 218 aa18.55■□□□□ 0.56
SEC13-218ENST00000490283 RTN3O95197 1032 aaPredicted RBP18.55■□□□□ 0.56
SEC13-218ENST00000490283 PFKLP17858 780 aa18.55■□□□□ 0.56
SEC13-218ENST00000490283 PPP1R2P41236 205 aa18.55■□□□□ 0.56
SEC13-218ENST00000490283 AMPD2Q01433 879 aa18.55■□□□□ 0.56
SEC13-218ENST00000490283 PPP2R5DQ14738 602 aa18.55■□□□□ 0.56
SEC13-218ENST00000490283 C1orf220Q5T0J3 134 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms