RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 FAXDC2Q96IV6 333 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 PRRX2Q99811 253 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 KCNH6Q9H252 994 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 CLSTN2Q9H4D0 955 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 BRD9Q9H8M2 597 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 IL21Q9HBE4 155 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 OBSL1O75147 1896 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 TRIOO75962 3097 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 SOBPA7XYQ1 873 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 HEPACAM2A8MVW5 462 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 PDGFBP01127 241 aaPredicted RBP15.19■□□□□ 0.02
BRCA1-218ENST00000489037 F11P03951 625 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 AVPR2P30518 371 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 AVPR1AP37288 418 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 VIPR2P41587 438 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 ASPAP45381 313 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 CLCN5P51795 746 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 ASTLQ6HA08 431 aaPredicted RBP15.19■□□□□ 0.02
BRCA1-218ENST00000489037 TTI2Q6NXR4 508 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 DENND5BQ6ZUT9 1274 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 ACOT1Q86TX2 421 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 ARID3BQ8IVW6 561 aaPredicted RBP15.19■□□□□ 0.02
BRCA1-218ENST00000489037 MFSD6LQ8IWD5 586 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 IRF7Q92985 503 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 C8orf48Q96LL4 319 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 MYRFLQ96LU7 910 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 DUSP9Q99956 384 aaKnown RBP15.19■□□□□ 0.02
BRCA1-218ENST00000489037 NT5C1AQ9BXI3 368 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 B3GNT5Q9BYG0 378 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 BCO2Q9BYV7 579 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 PLA2G2FQ9BZM2 168 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 SDCBP2Q9H190 292 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 NUP62CLQ9H1M0 184 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 ARHGEF3Q9NR81 526 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 NME7Q9Y5B8 376 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 ANAPC1Q9H1A4 1944 aa15.19■□□□□ 0.02
BRCA1-218ENST00000489037 F8VP50 259 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 CLDN5O00501 218 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 NRG2O14511 850 aaPredicted RBP15.18■□□□□ 0.02
BRCA1-218ENST00000489037 ZNF263O14978 683 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 CCDC192P0DO97 292 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 CD58P19256 250 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 FCARP24071 287 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 WEE1P30291 646 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 GDI1P31150 447 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 PRKCQQ04759 706 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 GRM2Q14416 872 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 TPD52L1Q16890 204 aaPredicted RBP15.18■□□□□ 0.02
BRCA1-218ENST00000489037 SLC44A4Q53GD3 710 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 STXBP5Q5T5C0 1151 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 POTEHQ6S545 545 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 VITQ6UXI7 678 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 CRYBG2Q8N1P7 616 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 MLKLQ8NB16 471 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 STKLD1Q8NE28 680 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 DNASE1L2Q92874 299 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 SMARCD1Q96GM5 515 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 SRRTQ9BXP5 876 aaKnown RBP15.18■□□□□ 0.02
BRCA1-218ENST00000489037 ZNF518BQ9C0D4 1074 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 FAM124BQ9H5Z6 455 aaPredicted RBP15.18■□□□□ 0.02
BRCA1-218ENST00000489037 APOBEC3GQ9HC16 384 aaKnown RBP15.18■□□□□ 0.02
BRCA1-218ENST00000489037 THG1LQ9NWX6 298 aaKnown RBP15.18■□□□□ 0.02
BRCA1-218ENST00000489037 OBP2AQ9NY56 170 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 DACH1Q9UI36 760 aa15.18■□□□□ 0.02
BRCA1-218ENST00000489037 ARIH1Q9Y4X5 557 aaPredicted RBP15.18■□□□□ 0.02
BRCA1-218ENST00000489037 MIA3Q5JRA6 1907 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 KMT2EQ8IZD2 1858 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 KRBA1A5PL33 1030 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 RTN3O95197 1032 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-218ENST00000489037 PPP3CCP48454 512 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 PDE6CP51160 858 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 NUBP1P53384 320 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 YWHAEP62258 255 aaKnown RBP15.17■□□□□ 0.02
BRCA1-218ENST00000489037 INCA1Q0VD86 236 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 MLF2Q15773 248 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-218ENST00000489037 CBWD6Q4V339 395 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 CBWD3Q5JTY5 395 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 CBWD5Q5RIA9 395 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 PHLDB3Q6NSJ2 640 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 FAM35AQ86V20 835 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 MON1AQ86VX9 555 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 CREBRFQ8IUR6 639 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 CMTM8Q8IZV2 173 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 CELF5Q8N6W0 485 aaKnown RBP15.17■□□□□ 0.02
BRCA1-218ENST00000489037 MAB21L3Q8N8X9 362 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 CSGALNACT1Q8TDX6 532 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 SEMA4DQ92854 862 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 SLC35C1Q96A29 364 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 SLC46A2Q9BY10 475 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 TBC1D17Q9HA65 648 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 DMAP1Q9NPF5 467 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-218ENST00000489037 LMBRD1Q9NUN5 540 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 TRPM5Q9NZQ8 1165 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 RWDD2AQ9UIY3 292 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 COQ4Q9Y3A0 265 aa15.17■□□□□ 0.02
BRCA1-218ENST00000489037 TRAV19A0A0A6YYK7 116 aa15.16■□□□□ 0.02
BRCA1-218ENST00000489037 AP1G2O75843 785 aa15.16■□□□□ 0.02
BRCA1-218ENST00000489037 AOC1P19801 751 aa15.16■□□□□ 0.02
BRCA1-218ENST00000489037 FMO5P49326 533 aa15.16■□□□□ 0.02
BRCA1-218ENST00000489037 VCPP55072 806 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms