RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 TMEM150AQ86TG1 271 aa14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 GUF1Q8N442 669 aaKnown RBP14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 MAB21L3Q8N8X9 362 aa14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 TMC2Q8TDI7 906 aa14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 PCED1BQ96HM7 432 aa14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 SPATA17Q96L03 361 aa14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 MRPL45Q9BRJ2 306 aaKnown RBP14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 SLC46A2Q9BY10 475 aa14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 XYLT2Q9H1B5 865 aa14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 NDRG2Q9UN36 371 aaKnown RBP14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 MTF2Q9Y483 593 aaPredicted RBP14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 MYH10P35580 1976 aa14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 VPS13AQ96RL7 3174 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 ATP8B3O60423 1300 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 A8MXQ7 604 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 IKBKBO14920 756 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 C4BPAP04003 597 aaKnown RBP14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 BDNFP23560 247 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 NR2F2P24468 414 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 RPL13P26373 211 aaKnown RBP14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 GRIK1P39086 918 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 PDE6CP51160 858 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 LRRC32Q14392 662 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 ZNF268Q14587 947 aaPredicted RBP14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 ZNF528Q3MIS6 628 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 MDH1BQ5I0G3 518 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 DENND5BQ6ZUT9 1274 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 INTS8Q75QN2 995 aaKnown RBP14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 MON1AQ86VX9 555 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 RALGPS2Q86X27 583 aaPredicted RBP14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 B3GALNT2Q8NCR0 500 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 STKLD1Q8NE28 680 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 PLEKHO2Q8TD55 490 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 TAF4BQ92750 862 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 IMPG2Q9BZV3 1241 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 ELOVL4Q9GZR5 314 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 TDP1Q9NUW8 608 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 RMND1Q9NWS8 449 aa14.73□□□□□ -0.05
SPTLC1-207ENST00000488921 CACNA1IQ9P0X4 2223 aa14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 TRAV19A0A0A6YYK7 116 aa14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 TADA3O75528 432 aa14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 SP9P0CG40 484 aa14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 KRT13P13646 458 aa14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 PTPN1P18031 435 aaKnown RBP14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 TRIM21P19474 475 aaKnown RBP14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 CCNE1P24864 410 aa14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 ENPEPQ07075 957 aa14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 PPP2R5DQ14738 602 aa14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 SGSM1Q2NKQ1 1148 aa14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 ZACNQ401N2 412 aa14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 TXNDC8Q6A555 127 aa14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 GPIHBP1Q8IV16 184 aa14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 TNIP3Q96KP6 325 aa14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 C8orf48Q96LL4 319 aa14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 IPO9Q96P70 1041 aaKnown RBP14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 CHRDQ9H2X0 955 aa14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 HOOK1Q9UJC3 728 aaKnown RBP14.72□□□□□ -0.05
SPTLC1-207ENST00000488921 SHISA7A6NL88 538 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 SPECC1L-ADORA2AF8WAN1 911 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 CKMP06732 381 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 USP17L7P0C7H9 530 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 PFKLP17858 780 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 CTHP32929 405 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 PSMC2P35998 433 aaKnown RBP14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 PIK3CAP42336 1068 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 PPP3CCP48454 512 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 VAMP7P51809 220 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 NOP14P78316 857 aaKnown RBP14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 FAM160A1Q05DH4 1040 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 ITPRIPL2Q3MIP1 535 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 CC2D1AQ6P1N0 951 aaPredicted RBP14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 ASCL5Q7RTU5 278 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 ZNF687Q8N1G0 1237 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 USP13Q92995 863 aaPredicted RBP14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 ZFYVE19Q96K21 471 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 LRRC3BQ96PB8 259 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 GTPBP4Q9BZE4 634 aaKnown RBP14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 SMG9Q9H0W8 520 aaKnown RBP14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 SMYD3Q9H7B4 428 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 TRPC7Q9HCX4 862 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 MAPK8IP1Q9UQF2 711 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 MYO16Q9Y6X6 1858 aa14.71□□□□□ -0.05
SPTLC1-207ENST00000488921 F5P12259 2224 aa14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 VNN1O95497 513 aa14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 DLG4P78352 724 aa14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 AMPD2Q01433 879 aa14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 FZD5Q13467 585 aa14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 EDRF1Q3B7T1 1238 aa14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 SCARA5Q6ZMJ2 495 aa14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 SV2AQ7L0J3 742 aa14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 FAM186BQ8IYM0 893 aa14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 MAML2Q8IZL2 1156 aaPredicted RBP14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 FMR1NBQ8N0W7 255 aaPredicted RBP14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 CCDC150Q8NCX0 1101 aa14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 TTLL2Q9BWV7 592 aa14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 DPEP3Q9H4B8 488 aa14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 LMAN1LQ9HAT1 526 aa14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 PRMT8Q9NR22 394 aaPredicted RBP14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 GTSE1Q9NYZ3 720 aa14.7□□□□□ -0.06
SPTLC1-207ENST00000488921 TRPM5Q9NZQ8 1165 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms