RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 MYCT1Q8N699 235 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 TRIML2Q8N7C3 387 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 DAGLBQ8NCG7 672 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 TMEM117Q9H0C3 514 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 GINM1Q9NU53 330 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 AFG3L2Q9Y4W6 797 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 DYTNA2CJ06 578 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 HNRNPCL1O60812 293 aaKnown RBP16.92■□□□□ 0.3
MCF2L-229ENST00000488765 TOP3BO95985 862 aaKnown RBP16.92■□□□□ 0.3
MCF2L-229ENST00000488765 NRLP54845 237 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 CDH15P55291 814 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 OASLQ15646 514 aaKnown RBP16.92■□□□□ 0.3
MCF2L-229ENST00000488765 FAIMQ9NVQ4 179 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 PCDHAC2Q9Y5I4 1007 aa16.92■□□□□ 0.3
MCF2L-229ENST00000488765 NDC80O14777 642 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 POLR2MP0CAP2 368 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 MAPK4P31152 587 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 YWHAGP61981 247 aaKnown RBP eCLIP16.91■□□□□ 0.3
MCF2L-229ENST00000488765 PSMD6Q15008 389 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 CATSPER3Q86XQ3 398 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 ZSWIM2Q8NEG5 633 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 CD101Q93033 1021 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 EYA3Q99504 573 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 VPS51Q9UID3 782 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 ACTL7BQ9Y614 415 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 TGFB1I1O43294 461 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 SERPINB7O75635 380 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 TAL1P17542 331 aaPredicted RBP16.91■□□□□ 0.3
MCF2L-229ENST00000488765 ADCY7P51828 1080 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 MYBPC1Q00872 1141 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 MYL7Q01449 175 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 PTK6Q13882 451 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 CCNIQ14094 377 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 KRT81Q14533 505 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 NRF1Q16656 503 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 XKR5Q6UX68 686 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 DHRS1Q96LJ7 313 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 SENP7Q9BQF6 1050 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 APOL6Q9BWW8 343 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 PLA2G4CQ9UP65 541 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 F8W8V4 182 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 FDFT1P37268 417 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 TSPY1Q01534 308 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 C12orf60Q5U649 245 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 PAFAH2Q99487 392 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 ZC3H12CQ9C0D7 883 aaKnown RBP16.91■□□□□ 0.3
MCF2L-229ENST00000488765 DNPEPQ9ULA0 475 aa16.91■□□□□ 0.3
MCF2L-229ENST00000488765 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.9■□□□□ 0.3
MCF2L-229ENST00000488765 PAPPAQ13219 1627 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 J3QRK9 145 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 TCEA3O75764 348 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 MT-ND3P03897 115 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 ARHGAP4P98171 946 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 GRM2Q14416 872 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 DCAF6Q58WW2 860 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 C11orf63Q6NUN7 778 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 CDHR3Q6ZTQ4 885 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 PTAR1Q7Z6K3 402 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-229ENST00000488765 DQX1Q8TE96 717 aaKnown RBP16.9■□□□□ 0.3
MCF2L-229ENST00000488765 CPA5Q8WXQ8 436 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 DHX38Q92620 1227 aaKnown RBP16.9■□□□□ 0.3
MCF2L-229ENST00000488765 FBXL8Q96CD0 374 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 SYT11Q9BT88 431 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 TUBB6Q9BUF5 446 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 PSMC3IPQ9P2W1 217 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-229ENST00000488765 FSCN2O14926 492 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 CHMP2AO43633 222 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 CDH2P19022 906 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-229ENST00000488765 DYNLT1P63172 113 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 TGFBIQ15582 683 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 BBS9Q3SYG4 887 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 NUP93Q8N1F7 819 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 CCDC127Q96BQ5 260 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 SERAC1Q96JX3 654 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 NDEL1Q9GZM8 345 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 PHLPP1O60346 1717 aa16.9■□□□□ 0.3
MCF2L-229ENST00000488765 MAGEC1O60732 1142 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 DNAJA2O60884 412 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 CD1EP15812 388 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 NAT1P18440 290 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 ALDH1A3P47895 512 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 MSS51Q4VC12 460 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 RC3H1Q5TC82 1133 aaKnown RBP16.89■□□□□ 0.29
MCF2L-229ENST00000488765 LPCAT2Q7L5N7 544 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 ZNF410Q86VK4 478 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 CCDC89Q8N998 374 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 PSPC1Q8WXF1 523 aaKnown RBP16.89■□□□□ 0.29
MCF2L-229ENST00000488765 DCUN1D1Q96GG9 259 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 SH2D3AQ9BRG2 576 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 C20orf27Q9GZN8 174 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 CAAP1Q9H8G2 361 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 TAGLN3Q9UI15 199 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 AP4B1Q9Y6B7 739 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 A6NL46 340 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 PIK3CDO00329 1044 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 TBCAO75347 108 aaKnown RBP16.89■□□□□ 0.29
MCF2L-229ENST00000488765 GGPS1O95749 300 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 PSMC2P35998 433 aaKnown RBP16.89■□□□□ 0.29
MCF2L-229ENST00000488765 ITGA9Q13797 1035 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 PRR16Q569H4 304 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms