RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 NXPH1P58417 271 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 RHBDL3P58872 404 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 EIF2B5Q13144 721 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 BIRC2Q13490 618 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 ZIK1Q3SY52 487 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 FAM209BQ5JX69 171 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 VWA1Q6PCB0 445 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 Q6ZNX1 250 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 DPP9Q86TI2 863 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 SLC15A3Q8IY34 581 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 SPARTQ8N0X7 666 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 SDR16C5Q8N3Y7 309 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 ATP11CQ8NB49 1132 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 PPP2R3CQ969Q6 453 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 RIPOR3Q96MK2 946 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 ELAC2Q9BQ52 826 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 CXorf36Q9H7Y0 433 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 INMTO95050 263 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 RHOP08100 348 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 CHRM2P08172 466 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 PDHA1P08559 390 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 TPH1P17752 444 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 KCNA3P22001 575 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 IL1R2P27930 398 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 PTDSS1P48651 473 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 ALDH5A1P51649 535 aaPredicted RBP4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 HNRNPMP52272 730 aaKnown RBP eCLIP4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 TAP1Q03518 808 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 FSTL1Q12841 308 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 MPP3Q13368 585 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 ARHGEF7Q14155 803 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 DEPDC1Q5TB30 811 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 RRAGBQ5VZM2 374 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 LAIR1Q6GTX8 287 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 Q6YL49 198 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 ZNF627Q7L945 461 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 FAM109AQ8N4B1 249 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 OR2C3Q8N628 320 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 BEND2Q8NDZ0 799 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 FKBP10Q96AY3 582 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 LRRC46Q96FV0 321 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 PGBD1Q96JS3 809 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 COQ10AQ96MF6 247 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 PSMD1Q99460 953 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 CERS4Q9HA82 394 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 NLRC4Q9NPP4 1024 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 XPNPEP3Q9NQH7 507 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 LRIT1Q9P2V4 623 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 PADI4Q9UM07 663 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 CEP83Q9Y592 693 aa4.65□□□□□ -1.67
ECHDC1-217ENST00000488087 CCP110O43303 1012 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 PROM1O43490 865 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 NCK2O43639 380 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 SRGAP2O75044 1071 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 PEX14O75381 377 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 PIAS2O75928 621 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 TGM1P22735 817 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 FOLR3P41439 243 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 CPT1AP50416 773 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 MRPS35P82673 323 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 HTRA4P83105 476 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 STK3Q13188 491 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 FHL2Q14192 279 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 TBCCQ15814 346 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 TEDDM1Q5T9Z0 273 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 HECTD2Q5U5R9 776 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 KAZNQ674X7 775 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 HIBCHQ6NVY1 386 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 BEND5Q7L4P6 421 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 ULK2Q8IYT8 1036 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 TXLNBQ8N3L3 684 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 TMEM171Q8WVE6 324 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 TFAP2BQ92481 460 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 GJA10Q969M2 543 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 ZC3H10Q96K80 434 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 RPS6KC1Q96S38 1066 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 PRRX2Q99811 253 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 TTPALQ9BTX7 342 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 KLC4Q9NSK0 619 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 SSX2IPQ9Y2D8 614 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 CDY1Q9Y6F8 540 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 COMMD10Q9Y6G5 202 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 MAST3O60307 1309 aa4.64□□□□□ -1.67
ECHDC1-217ENST00000488087 GRID2IPA4D2P6 1211 aa4.63□□□□□ -1.67
ECHDC1-217ENST00000488087 AQP7P3A6NL99 342 aa4.63□□□□□ -1.67
ECHDC1-217ENST00000488087 MPPED1O15442 326 aa4.63□□□□□ -1.67
ECHDC1-217ENST00000488087 RRP9O43818 475 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-217ENST00000488087 TLR5O60602 858 aa4.63□□□□□ -1.67
ECHDC1-217ENST00000488087 ESRRBO95718 433 aa4.63□□□□□ -1.67
ECHDC1-217ENST00000488087 BTF3P20290 206 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-217ENST00000488087 FGFR2P21802 821 aa4.63□□□□□ -1.67
ECHDC1-217ENST00000488087 ADORA2AP29274 412 aa4.63□□□□□ -1.67
ECHDC1-217ENST00000488087 PRKAR1BP31321 381 aa4.63□□□□□ -1.67
ECHDC1-217ENST00000488087 PDE6CP51160 858 aa4.63□□□□□ -1.67
ECHDC1-217ENST00000488087 SEC24CP53992 1094 aa4.63□□□□□ -1.67
ECHDC1-217ENST00000488087 SP2Q02086 613 aa4.63□□□□□ -1.67
ECHDC1-217ENST00000488087 PMS2P11Q13670 270 aa4.63□□□□□ -1.67
ECHDC1-217ENST00000488087 NBPF8Q3BBV2 869 aa4.63□□□□□ -1.67
ECHDC1-217ENST00000488087 ARL13BQ3SXY8 428 aa4.63□□□□□ -1.67
ECHDC1-217ENST00000488087 IZUMO3Q5VZ72 239 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms