RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, human

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP3-208	ENST00000487997	ABCB6	Q9NP58	842 aa		10.16	□□□□□ -0.78
PTBP3-208	ENST00000487997	ASAH2	Q9NR71	780 aa		10.16	□□□□□ -0.78
PTBP3-208	ENST00000487997	HCFC1R1	Q9NWW0	138 aa		10.16	□□□□□ -0.78
PTBP3-208	ENST00000487997	RAB20	Q9NX57	234 aa		10.16	□□□□□ -0.78
PTBP3-208	ENST00000487997	TOR4A	Q9NXH8	423 aa		10.16	□□□□□ -0.78
PTBP3-208	ENST00000487997	DNMT3B	Q9UBC3	853 aa	Known RBP	10.16	□□□□□ -0.78
PTBP3-208	ENST00000487997	MRPS23	Q9Y3D9	190 aa	Known RBP	10.16	□□□□□ -0.78
PTBP3-208	ENST00000487997	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	10.16	□□□□□ -0.78
PTBP3-208	ENST00000487997	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	10.16	□□□□□ -0.78
PTBP3-208	ENST00000487997	NUP210	Q8TEM1	1887 aa	Predicted RBP	10.16	□□□□□ -0.78
PTBP3-208	ENST00000487997	MYO16	Q9Y6X6	1858 aa		10.16	□□□□□ -0.78
PTBP3-208	ENST00000487997	ATP8B3	O60423	1300 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	MYBPHL	A2RUH7	354 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	ZBTB24	O43167	697 aa	Predicted RBP	10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	ATP2C2	O75185	946 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	FGF19	O95750	216 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	HAPLN1	P10915	354 aa	Predicted RBP	10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	MYL4	P12829	197 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	ALAD	P13716	330 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	PTPN1	P18031	435 aa	Known RBP	10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	ANXA13	P27216	316 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	ERCC5	P28715	1186 aa	Predicted RBP	10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	MTIF2	P46199	727 aa	Known RBP	10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	RAP1GAP	P47736	663 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	FMO5	P49326	533 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	MCCD1	P59942	119 aa	Predicted RBP	10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	NTHL1	P78549	312 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	DPCR1	Q3MIW9	517 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	ZNF787	Q6DD87	383 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	SPOPL	Q6IQ16	392 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	FAM171B	Q6P995	826 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	SCN4B	Q8IWT1	228 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	TTC39C	Q8N584	583 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	FEZF2	Q8TBJ5	459 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	MYCBPAP	Q8TBZ2	947 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	SLC35C1	Q96A29	364 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	ELMO3	Q96BJ8	720 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	FUBP3	Q96I24	572 aa	Known RBP eCLIP	10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	FAXDC2	Q96IV6	333 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	GCNA	Q96QF7	691 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	NIF3L1	Q9GZT8	377 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	CRISPLD1	Q9H336	500 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	CYP3A43	Q9HB55	503 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	CD320	Q9NPF0	282 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	TMLHE	Q9NVH6	421 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	CEP72	Q9P209	647 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997	LIMD1	Q9UGP4	676 aa		10.15	□□□□□ -0.78
PTBP3-208	ENST00000487997		A0A0C4DFX4	3053 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	P4HA2	O15460	535 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	HCRT	O43612	131 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	SOAT2	O75908	522 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	VNN2	O95498	520 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	AFP	P02771	609 aa	Known RBP	10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	CD58	P19256	250 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	CYP2F1	P24903	491 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	GRIK1	P39086	918 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	NDST1	P52848	882 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	MARS	P56192	900 aa	Known RBP	10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	YWHAE	P62258	255 aa	Known RBP	10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	KCNH2	Q12809	1159 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	CFAP221	Q4G0U5	840 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	CBWD6	Q4V339	395 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	MDH1B	Q5I0G3	518 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	CBWD3	Q5JTY5	395 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	CBWD5	Q5RIA9	395 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	VSTM1	Q6UX27	236 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	UNC93A	Q86WB7	457 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	TTC9B	Q8N6N2	239 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	B3GALNT2	Q8NCR0	500 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	GIPC2	Q8TF65	315 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	ING5	Q8WYH8	240 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	PSMG2	Q969U7	264 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	MYLPF	Q96A32	169 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	PCED1B	Q96HM7	432 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	CNOT6L	Q96LI5	555 aa	Known RBP	10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	MED10	Q9BTT4	135 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	THAP9	Q9H5L6	903 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	AVEN	Q9NQS1	362 aa	Predicted RBP	10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	ANO10	Q9NW15	660 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	IGSF9	Q9P2J2	1179 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	CDH7	Q9ULB5	785 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	PATJ	Q8NI35	1801 aa		10.14	□□□□□ -0.79
PTBP3-208	ENST00000487997	HELZ	P42694	1942 aa	Known RBP	10.13	□□□□□ -0.79
PTBP3-208	ENST00000487997	ST8SIA5	O15466	376 aa		10.13	□□□□□ -0.79
PTBP3-208	ENST00000487997	DCX	O43602	365 aa		10.13	□□□□□ -0.79
PTBP3-208	ENST00000487997	MICAL2	O94851	1124 aa		10.13	□□□□□ -0.79
PTBP3-208	ENST00000487997	CSH1	P0DML2	217 aa		10.13	□□□□□ -0.79
PTBP3-208	ENST00000487997	CSH2	P0DML3	217 aa		10.13	□□□□□ -0.79
PTBP3-208	ENST00000487997	LAMP2	P13473	410 aa		10.13	□□□□□ -0.79
PTBP3-208	ENST00000487997	BDNF	P23560	247 aa		10.13	□□□□□ -0.79
PTBP3-208	ENST00000487997	TBXAS1	P24557	533 aa	Predicted RBP	10.13	□□□□□ -0.79
PTBP3-208	ENST00000487997	MAGEA11	P43364	429 aa		10.13	□□□□□ -0.79
PTBP3-208	ENST00000487997	ASPA	P45381	313 aa		10.13	□□□□□ -0.79
PTBP3-208	ENST00000487997	STX1A	Q16623	288 aa		10.13	□□□□□ -0.79
PTBP3-208	ENST00000487997	ARHGAP15	Q53QZ3	475 aa		10.13	□□□□□ -0.79
PTBP3-208	ENST00000487997	CAVIN1	Q6NZI2	390 aa	Known RBP	10.13	□□□□□ -0.79
PTBP3-208	ENST00000487997	RBM43	Q6ZSC3	357 aa	Known RBP	10.13	□□□□□ -0.79
PTBP3-208	ENST00000487997	MTSS1L	Q765P7	747 aa		10.13	□□□□□ -0.79
PTBP3-208	ENST00000487997	ACOT1	Q86TX2	421 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms