RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 NFIL3Q16649 462 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 LRRC8EQ6NSJ5 796 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 TRIM67Q6ZTA4 783 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12□□□□□ -0.495e-12■■■■□ 22.4
DDX39B-219ENST00000481456 KAT5Q92993 513 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 TMA16Q96EY4 203 aaKnown RBP12□□□□□ -0.49
DDX39B-219ENST00000481456 MPP4Q96JB8 637 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 SLC4A9Q96Q91 983 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 GORASP1Q9BQQ3 440 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 SHCBP1LQ9BZQ2 653 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 LGALS13Q9UHV8 139 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 TRPC5Q9UL62 973 aaPredicted RBP12□□□□□ -0.49
DDX39B-219ENST00000481456 AKT3Q9Y243 479 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 DPPA5A6NC42 116 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 EMC2Q15006 297 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 SMAD1Q15797 465 aaKnown RBP12□□□□□ -0.49
DDX39B-219ENST00000481456 ACBD5Q5T8D3 534 aaPredicted RBP12□□□□□ -0.49
DDX39B-219ENST00000481456 OTOAQ7RTW8 1153 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 DCLK2Q8N568 766 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 C12orf50Q8NA57 414 aaPredicted RBP12□□□□□ -0.49
DDX39B-219ENST00000481456 RDM1Q8NG50 284 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 ACTL9Q8TC94 416 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 SRPK1Q96SB4 655 aaKnown RBP12□□□□□ -0.49
DDX39B-219ENST00000481456 MRPL1Q9BYD6 325 aaKnown RBP12□□□□□ -0.49
DDX39B-219ENST00000481456 VPS33BQ9H267 617 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 XAB2Q9HCS7 855 aaKnown RBP12□□□□□ -0.49
DDX39B-219ENST00000481456 DMAP1Q9NPF5 467 aaPredicted RBP12□□□□□ -0.49
DDX39B-219ENST00000481456 DCDC2Q9UHG0 476 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 NR2E1Q9Y466 385 aa12□□□□□ -0.49
DDX39B-219ENST00000481456 MYH8P13535 1937 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 SPATA31C1P0DKV0 1188 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 NUDT2P50583 147 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 ZDHHC24Q6UX98 284 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 MFSD7Q6UXD7 560 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 ATXN7L3BQ96GX2 97 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 ZNF189O75820 626 aaPredicted RBP11.99□□□□□ -0.49
DDX39B-219ENST00000481456 NPTXRO95502 500 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 CNTFP26441 200 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 STXBP2Q15833 593 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 PSPC1Q8WXF1 523 aaKnown RBP11.99□□□□□ -0.49
DDX39B-219ENST00000481456 TMEM143Q96AN5 459 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 MAML3Q96JK9 1138 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 PPP1R36Q96LQ0 422 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 PWWP2AQ96N64 755 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 CDYLQ9Y232 598 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 ATF5Q9Y2D1 282 aaPredicted RBP11.99□□□□□ -0.49
DDX39B-219ENST00000481456 GNGT2O14610 69 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 LIASO43766 372 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 TMCC1O94876 653 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 PAMP19021 973 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 ITKQ08881 620 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 NCAPG2Q86XI2 1143 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 ASAP3Q8TDY4 903 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 ORC6Q9Y5N6 252 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 COMMD3-BMI1R4GMX3 469 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 CRYBG1Q9Y4K1 1723 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 THRAP10827 490 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 GPD1P21695 349 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 ELK3P41970 407 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 WDR72Q3MJ13 1102 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 CCDC92Q53HC0 331 aaPredicted RBP11.99□□□□□ -0.49
DDX39B-219ENST00000481456 PGBD4Q96DM1 585 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 FAM163AQ96GL9 167 aaPredicted RBP11.99□□□□□ -0.49
DDX39B-219ENST00000481456 LRRC4Q9HBW1 653 aa11.99□□□□□ -0.49
DDX39B-219ENST00000481456 SPATA31A1Q5TZJ5 1347 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 XPOTO43592 962 aaKnown RBP11.98□□□□□ -0.49
DDX39B-219ENST00000481456 IL10P22301 178 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 CASP2P42575 452 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 HADHBP55084 474 aaKnown RBP11.98□□□□□ -0.49
DDX39B-219ENST00000481456 HDAC4P56524 1084 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 TKFCQ3LXA3 575 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 KCNT1Q5JUK3 1230 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 FAM182BQ5T319 152 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 SIX6OS1Q8N1H7 587 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 ALLCQ8N6M5 410 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 ZFRQ96KR1 1074 aaKnown RBP11.98□□□□□ -0.49
DDX39B-219ENST00000481456 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.98□□□□□ -0.49
DDX39B-219ENST00000481456 MRGBPQ9NV56 204 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 DRG1Q9Y295 367 aaKnown RBP11.98□□□□□ -0.49
DDX39B-219ENST00000481456 AFG3L2Q9Y4W6 797 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 DUOX1Q9NRD9 1551 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 FAM200BP0CF97 657 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 SPRP35270 261 aaPredicted RBP11.98□□□□□ -0.49
DDX39B-219ENST00000481456 GCLCP48506 637 aaPredicted RBP11.98□□□□□ -0.49
DDX39B-219ENST00000481456 ACTR2P61160 394 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 PDPK2PQ6A1A2 396 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 OR6B3Q8NGW1 331 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 VPS39Q96JC1 886 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 L3MBTL3Q96JM7 780 aaPredicted RBP11.98□□□□□ -0.49
DDX39B-219ENST00000481456 CATSPER2Q96P56 530 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 ING2Q9H160 280 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 SLC5A4Q9NY91 659 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 ZC3H4Q9UPT8 1303 aaKnown RBP11.98□□□□□ -0.49
DDX39B-219ENST00000481456 FER1L4A9Z1Z3 1794 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 XPO1O14980 1071 aaKnown RBP11.98□□□□□ -0.49
DDX39B-219ENST00000481456 ZBTB39O15060 712 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 ZSCAN5DPP0CG00 497 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 ANPEPP15144 967 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 PRKCEQ02156 737 aa11.98□□□□□ -0.49
DDX39B-219ENST00000481456 TBL3Q12788 808 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms