RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 MLXIPQ9HAP2 919 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 ZNF277Q9NRM2 450 aaPredicted RBP3.38□□□□□ -1.87
XRN1-211ENST00000477237 TMEM184CQ9NVA4 438 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 ERRFI1Q9UJM3 462 aaPredicted RBP3.38□□□□□ -1.87
XRN1-211ENST00000477237 TUBD1Q9UJT1 453 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 LIMCH1Q9UPQ0 1083 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 AGAP1Q9UPQ3 857 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 SH2B3Q9UQQ2 575 aa3.38□□□□□ -1.87
XRN1-211ENST00000477237 F2RL2O00254 374 aa3.37□□□□□ -1.87
XRN1-211ENST00000477237 EXOC3O60645 756 aa3.37□□□□□ -1.87
XRN1-211ENST00000477237 SOAT2O75908 522 aa3.37□□□□□ -1.87
XRN1-211ENST00000477237 IGKV3-20P01619 116 aa3.37□□□□□ -1.87
XRN1-211ENST00000477237 SMARCA1P28370 1054 aa3.37□□□□□ -1.87
XRN1-211ENST00000477237 WASP42768 502 aa3.37□□□□□ -1.87
XRN1-211ENST00000477237 ME1P48163 572 aa3.37□□□□□ -1.87
XRN1-211ENST00000477237 GCLCP48506 637 aaPredicted RBP3.37□□□□□ -1.87
XRN1-211ENST00000477237 TOB1P50616 345 aaPredicted RBP3.37□□□□□ -1.87
XRN1-211ENST00000477237 ZXDBP98169 803 aa3.37□□□□□ -1.87
XRN1-211ENST00000477237 PPP4R3AQ6IN85 833 aa3.37□□□□□ -1.87
XRN1-211ENST00000477237 TMEM108Q6UXF1 575 aa3.37□□□□□ -1.87
XRN1-211ENST00000477237 COLCA1Q6ZS62 124 aa3.37□□□□□ -1.87
XRN1-211ENST00000477237 PARS2Q7L3T8 475 aaKnown RBP3.37□□□□□ -1.87
XRN1-211ENST00000477237 TICAM2Q86XR7 235 aa3.37□□□□□ -1.87
XRN1-211ENST00000477237 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.37□□□□□ -1.87
XRN1-211ENST00000477237 MAN1C1Q9NR34 630 aa3.37□□□□□ -1.87
XRN1-211ENST00000477237 CALCOCO1Q9P1Z2 691 aa3.37□□□□□ -1.87
XRN1-211ENST00000477237 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.37□□□□□ -1.87
XRN1-211ENST00000477237 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 CCDC154A6NI56 674 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 UBE2Q2LH0YL09 131 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 GPR39O43194 453 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 HTRA2O43464 458 aaPredicted RBP3.36□□□□□ -1.87
XRN1-211ENST00000477237 SGTAO43765 313 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 TLR5O60602 858 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 A1BGP04217 495 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 FESP07332 822 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 MALP21145 153 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 CNGA1P29973 690 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 ERVK-21P61565 698 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 KLF1Q13351 362 aaPredicted RBP3.36□□□□□ -1.87
XRN1-211ENST00000477237 SNAPC2Q13487 334 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 SERPINA13PQ6UXR4 307 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 PDSS2Q86YH6 399 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 AFAP1L2Q8N4X5 818 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 TERB1Q8NA31 727 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 B4GALNT2Q8NHY0 566 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 RP9Q8TA86 221 aaKnown RBP3.36□□□□□ -1.87
XRN1-211ENST00000477237 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.36□□□□□ -1.87
XRN1-211ENST00000477237 WFIKKN2Q8TEU8 576 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 XAGE5Q8WWM1 108 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 JADE3Q92613 823 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 THAP7Q9BT49 309 aaPredicted RBP3.36□□□□□ -1.87
XRN1-211ENST00000477237 C1orf43Q9BWL3 253 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 SLKQ9H2G2 1235 aaPredicted RBP3.36□□□□□ -1.87
XRN1-211ENST00000477237 GNL3LQ9NVN8 582 aaKnown RBP3.36□□□□□ -1.87
XRN1-211ENST00000477237 CFAP97Q9P2B7 532 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 SERTAD3Q9UJW9 196 aa3.36□□□□□ -1.87
XRN1-211ENST00000477237 A0A087WYN8 130 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 TCRBV5S1A1TA0A578 114 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 M0QYG6 137 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 TLR2O60603 784 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 EYA4O95677 639 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 CHEK2O96017 543 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 C5AR1P21730 350 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 CYP2C19P33261 490 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 RENBPP51606 427 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 KIF23Q02241 960 aaPredicted RBP3.35□□□□□ -1.87
XRN1-211ENST00000477237 ICE2Q659A1 982 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 SLC4A10Q6U841 1118 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 ZNF329Q86UD4 541 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 CUZD1Q86UP6 607 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 SPATS2Q86XZ4 545 aaKnown RBP3.35□□□□□ -1.87
XRN1-211ENST00000477237 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.35□□□□□ -1.87
XRN1-211ENST00000477237 ARFGAP1Q8N6T3 406 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 TNPO1Q92973 898 aaKnown RBP3.35□□□□□ -1.87
XRN1-211ENST00000477237 CCDC136Q96JN2 1154 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 FAM84BQ96KN1 310 aaPredicted RBP3.35□□□□□ -1.87
XRN1-211ENST00000477237 SNX18Q96RF0 628 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 DMRTA2Q96SC8 542 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 TTYH3Q9C0H2 523 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 SIK2Q9H0K1 926 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 ZBTB40Q9NUA8 1239 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 MKS1Q9NXB0 559 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 IPPQ9Y573 584 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 HS3ST3B1Q9Y662 390 aa3.35□□□□□ -1.87
XRN1-211ENST00000477237 LRRC14BA6NHZ5 514 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 ENPP3O14638 875 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 XPOTO43592 962 aaKnown RBP3.34□□□□□ -1.87
XRN1-211ENST00000477237 TULP3O75386 442 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 CLSTN1O94985 981 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 RPLP2P05387 115 aaKnown RBP3.34□□□□□ -1.87
XRN1-211ENST00000477237 EDNRBP24530 442 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 ALDH5A1P51649 535 aaPredicted RBP3.34□□□□□ -1.87
XRN1-211ENST00000477237 GPSM2P81274 684 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 BOP1Q14137 746 aaKnown RBP3.34□□□□□ -1.87
XRN1-211ENST00000477237 ASIC2Q16515 512 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 UAP1L1Q3KQV9 507 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 L1TD1Q5T7N2 865 aaKnown RBP3.34□□□□□ -1.87
XRN1-211ENST00000477237 LAYNQ6UX15 382 aa3.34□□□□□ -1.87
XRN1-211ENST00000477237 Q6ZWC4 215 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms