RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 TMEM169Q96HH4 297 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 PAWRQ96IZ0 340 aaKnown RBP11.39□□□□□ -0.59
VAPB-204ENST00000475243 CNDP1Q96KN2 507 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 XPO1O14980 1071 aaKnown RBP11.39□□□□□ -0.59
VAPB-204ENST00000475243 POLD3Q15054 466 aaPredicted RBP11.39□□□□□ -0.59
VAPB-204ENST00000475243 CHMP1BQ7LBR1 199 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 FBXO33Q7Z6M2 555 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 PPIL6Q8IXY8 311 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 TPCN2Q8NHX9 752 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 ELMO3Q96BJ8 720 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 ERLEC1Q96DZ1 483 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 APOL2Q9BQE5 337 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 KLHL2O95198 593 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 GSNP06396 782 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 DNAJB2P25686 324 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 TARSP26639 723 aaKnown RBP11.38□□□□□ -0.59
VAPB-204ENST00000475243 CHST13Q8NET6 341 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 E2F7Q96AV8 911 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 CHST12Q9NRB3 414 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 RPS6KL1Q9Y6S9 549 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 DUSP10Q9Y6W6 482 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 FOXN3O00409 490 aaPredicted RBP11.38□□□□□ -0.59
VAPB-204ENST00000475243 CYB561D2O14569 222 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 PON1P27169 355 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 SEC24CP53992 1094 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 TRIP10Q15642 601 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 ATP6V0D2Q8N8Y2 350 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 FBXO32Q969P5 355 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 VMP1Q96GC9 406 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 RIT2Q99578 217 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 PIF1Q9H611 641 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 GID8Q9NWU2 228 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 RNF17Q9BXT8 1623 aaKnown RBP11.38□□□□□ -0.59
VAPB-204ENST00000475243 LZTS3O60299 673 aaPredicted RBP11.38□□□□□ -0.59
VAPB-204ENST00000475243 FAM83EQ2M2I3 478 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 DNAL1Q4LDG9 190 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 RINLQ6ZS11 566 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 NOA1Q8NC60 698 aaKnown RBP11.38□□□□□ -0.59
VAPB-204ENST00000475243 TULP4Q9NRJ4 1543 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 C2orf81A6NN90 581 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 EIF3HO15372 352 aaKnown RBP eCLIP11.38□□□□□ -0.59
VAPB-204ENST00000475243 STX7O15400 261 aaKnown RBP11.38□□□□□ -0.59
VAPB-204ENST00000475243 DAB1O75553 588 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 ZNF189O75820 626 aaPredicted RBP11.38□□□□□ -0.59
VAPB-204ENST00000475243 SUPT7LO94864 414 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 KRT8P05787 483 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 CSF1RP07333 972 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 TAL1P17542 331 aaPredicted RBP11.38□□□□□ -0.59
VAPB-204ENST00000475243 CDH2P19022 906 aaPredicted RBP11.38□□□□□ -0.59
VAPB-204ENST00000475243 PRKCQQ04759 706 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 ERAP2Q6P179 960 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 PRMT6Q96LA8 375 aaPredicted RBP11.38□□□□□ -0.59
VAPB-204ENST00000475243 PPP1R3GB7ZBB8 358 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 ALDH1A2O94788 518 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 S100A5P33763 92 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 SERPINB4P48594 390 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 SLC11A2P49281 568 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 NUDT2P50583 147 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 ZNF614Q8N883 585 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 FAM111AQ96PZ2 611 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 ITSN1Q15811 1721 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 ZNF286BP0CG31 522 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 RANBP1P43487 201 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 GEMIN4P57678 1058 aaKnown RBP11.38□□□□□ -0.59
VAPB-204ENST00000475243 ANKS1AQ92625 1134 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 FAM129AQ9BZQ8 928 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 ANKEF1Q9NU02 776 aa11.38□□□□□ -0.59
VAPB-204ENST00000475243 NAPEPLDQ6IQ20 393 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 TMEM154Q6P9G4 183 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 PRUNE1Q86TP1 453 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 USP38Q8NB14 1042 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 GIMAP4Q9NUV9 329 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 NSMCE4AQ9NXX6 385 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 UBP1Q9NZI7 540 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 MTO1Q9Y2Z2 717 aaKnown RBP11.37□□□□□ -0.59
VAPB-204ENST00000475243 CDY2AQ9Y6F7 541 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 CDY1Q9Y6F8 540 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 CASTOR2A6NHX0 329 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 TRIM49D1C9J1S8 452 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 SREBF2Q12772 1141 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 RIN3Q8TB24 985 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 XPO6Q96QU8 1125 aaKnown RBP11.37□□□□□ -0.59
VAPB-204ENST00000475243 YME1L1Q96TA2 773 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 MED24O75448 989 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 UBTFL6P0CB48 400 aaPredicted RBP11.37□□□□□ -0.59
VAPB-204ENST00000475243 ARP10275 920 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 MBL2P11226 248 aaPredicted RBP11.37□□□□□ -0.59
VAPB-204ENST00000475243 FCGRTP55899 365 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 MTFR1Q15390 333 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 MAGEB10Q96LZ2 347 aaPredicted RBP11.37□□□□□ -0.59
VAPB-204ENST00000475243 KCNK16Q96T55 309 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 PRR23D1E9PI22 279 aaPredicted RBP11.37□□□□□ -0.59
VAPB-204ENST00000475243 NTSR2O95665 410 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 PRR23D2P0DMB1 279 aaPredicted RBP11.37□□□□□ -0.59
VAPB-204ENST00000475243 PRIM2P49643 509 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 DNAAF5Q86Y56 855 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 CBWD2Q8IUF1 395 aa11.37□□□□□ -0.59
VAPB-204ENST00000475243 CLK1P49759 484 aaKnown RBP11.37□□□□□ -0.59
VAPB-204ENST00000475243 EZH2Q15910 746 aaKnown RBP11.37□□□□□ -0.59
VAPB-204ENST00000475243 PGS1Q32NB8 556 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms