RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 FCHO2Q0JRZ9 810 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 ANGPT1Q15389 498 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 EDRF1Q3B7T1 1238 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 ZNF658Q5TYW1 1059 aaPredicted RBP19.13■□□□□ 0.65
UPF3A-203ENST00000474056 SPOPLQ6IQ16 392 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 VSTM1Q6UX27 236 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 YAF2Q8IY57 180 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 CMTM8Q8IZV2 173 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 B3GALNT2Q8NCR0 500 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 SMARCE1Q969G3 411 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 EEF2KMTQ96G04 330 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 MYRFLQ96LU7 910 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 IRF2BPLQ9H1B7 796 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 TRPV5Q9NQA5 729 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 OBP2AQ9NY56 170 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 CIZ1Q9ULV3 898 aaPredicted RBP19.13■□□□□ 0.65
UPF3A-203ENST00000474056 MYO16Q9Y6X6 1858 aa19.13■□□□□ 0.65
UPF3A-203ENST00000474056 DMDP11532 3685 aa19.12■□□□□ 0.65
UPF3A-203ENST00000474056 FAM170BA6NMN3 283 aa19.12■□□□□ 0.65
UPF3A-203ENST00000474056 CHADO15335 359 aa19.12■□□□□ 0.65
UPF3A-203ENST00000474056 GADD45BO75293 160 aaPredicted RBP19.12■□□□□ 0.65
UPF3A-203ENST00000474056 KRT13P13646 458 aa19.12■□□□□ 0.65
UPF3A-203ENST00000474056 DDX6P26196 483 aaKnown RBP eCLIP19.12■□□□□ 0.65
UPF3A-203ENST00000474056 GCLMP48507 274 aa19.12■□□□□ 0.65
UPF3A-203ENST00000474056 MRE11P49959 708 aa19.12■□□□□ 0.65
UPF3A-203ENST00000474056 CACNA2D1P54289 1103 aa19.12■□□□□ 0.65
UPF3A-203ENST00000474056 PPP3CAQ08209 521 aa19.12■□□□□ 0.65
UPF3A-203ENST00000474056 SGSM1Q2NKQ1 1148 aa19.12■□□□□ 0.65
UPF3A-203ENST00000474056 COBLL1Q53SF7 1204 aa19.12■□□□□ 0.65
UPF3A-203ENST00000474056 MRPS31Q92665 395 aaKnown RBP19.12■□□□□ 0.65
UPF3A-203ENST00000474056 ZFYVE19Q96K21 471 aa19.12■□□□□ 0.65
UPF3A-203ENST00000474056 SPATA17Q96L03 361 aa19.12■□□□□ 0.65
UPF3A-203ENST00000474056 MMRN2Q9H8L6 949 aa19.12■□□□□ 0.65
UPF3A-203ENST00000474056 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.12■□□□□ 0.655e-6■■■■■ 31.1
UPF3A-203ENST00000474056 TMEM30AQ9NV96 361 aa19.12■□□□□ 0.65
UPF3A-203ENST00000474056 ZMYM5Q9UJ78 669 aa19.12■□□□□ 0.65
UPF3A-203ENST00000474056 F8VP50 259 aa19.11■□□□□ 0.65
UPF3A-203ENST00000474056 CLDN5O00501 218 aa19.11■□□□□ 0.65
UPF3A-203ENST00000474056 TRIM66O15016 1216 aa19.11■□□□□ 0.65
UPF3A-203ENST00000474056 SMC2O95347 1197 aa19.11■□□□□ 0.65
UPF3A-203ENST00000474056 ASS1P00966 412 aaKnown RBP19.11■□□□□ 0.65
UPF3A-203ENST00000474056 ANXA13P27216 316 aa19.11■□□□□ 0.65
UPF3A-203ENST00000474056 AVPR1AP37288 418 aa19.11■□□□□ 0.65
UPF3A-203ENST00000474056 USP46P62068 366 aa19.11■□□□□ 0.65
UPF3A-203ENST00000474056 ZNF852Q6ZMS4 543 aa19.11■□□□□ 0.65
UPF3A-203ENST00000474056 BPIFB1Q8TDL5 484 aa19.11■□□□□ 0.65
UPF3A-203ENST00000474056 B3GNT5Q9BYG0 378 aa19.11■□□□□ 0.65
UPF3A-203ENST00000474056 OSBPL6Q9BZF3 934 aa19.11■□□□□ 0.65
UPF3A-203ENST00000474056 ZNF518BQ9C0D4 1074 aa19.11■□□□□ 0.65
UPF3A-203ENST00000474056 CCL26Q9Y258 94 aa19.11■□□□□ 0.65
UPF3A-203ENST00000474056 PIAS3Q9Y6X2 628 aa19.11■□□□□ 0.65
UPF3A-203ENST00000474056 ATG2BQ96BY7 2078 aa19.1■□□□□ 0.65
UPF3A-203ENST00000474056 TRIM49BA6NDI0 452 aa19.1■□□□□ 0.65
UPF3A-203ENST00000474056 ASPAP45381 313 aa19.1■□□□□ 0.65
UPF3A-203ENST00000474056 PMS1P54277 932 aaKnown RBP19.1■□□□□ 0.65
UPF3A-203ENST00000474056 ENPEPQ07075 957 aa19.1■□□□□ 0.65
UPF3A-203ENST00000474056 DENND5BQ6ZUT9 1274 aa19.1■□□□□ 0.65
UPF3A-203ENST00000474056 MON1AQ86VX9 555 aa19.1■□□□□ 0.65
UPF3A-203ENST00000474056 CELF5Q8N6W0 485 aaKnown RBP19.1■□□□□ 0.65
UPF3A-203ENST00000474056 CSGALNACT1Q8TDX6 532 aa19.1■□□□□ 0.65
UPF3A-203ENST00000474056 TAS1R2Q8TE23 839 aa19.1■□□□□ 0.65
UPF3A-203ENST00000474056 TAF4BQ92750 862 aa19.1■□□□□ 0.65
UPF3A-203ENST00000474056 USP13Q92995 863 aaPredicted RBP19.1■□□□□ 0.65
UPF3A-203ENST00000474056 C8orf48Q96LL4 319 aa19.1■□□□□ 0.65
UPF3A-203ENST00000474056 APOBEC3GQ9HC16 384 aaKnown RBP19.1■□□□□ 0.65
UPF3A-203ENST00000474056 HMGXB4Q9UGU5 601 aa19.1■□□□□ 0.65
UPF3A-203ENST00000474056 HOOK1Q9UJC3 728 aaKnown RBP19.1■□□□□ 0.65
UPF3A-203ENST00000474056 NDRG2Q9UN36 371 aaKnown RBP19.1■□□□□ 0.65
UPF3A-203ENST00000474056 CETN3O15182 167 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 KINO60870 393 aaKnown RBP19.09■□□□□ 0.65
UPF3A-203ENST00000474056 P4HA1P13674 534 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 SOX9P48436 509 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 MCCD1P59942 119 aaPredicted RBP19.09■□□□□ 0.65
UPF3A-203ENST00000474056 NOP14P78316 857 aaKnown RBP19.09■□□□□ 0.65
UPF3A-203ENST00000474056 ORC1Q13415 861 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 FZD5Q13467 585 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 ARHGAP29Q52LW3 1261 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 ANKRD40Q6AI12 368 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 ISM2Q6H9L7 571 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 FAM35AQ86V20 835 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 ELOA2Q8IYF1 753 aaPredicted RBP19.09■□□□□ 0.65
UPF3A-203ENST00000474056 ADSSL1Q8N142 457 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 PIAS4Q8N2W9 510 aaPredicted RBP19.09■□□□□ 0.65
UPF3A-203ENST00000474056 TTC8Q8TAM2 541 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 RIN3Q8TB24 985 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 CEP295NLQ96MC4 621 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 SLC22A12Q96S37 553 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 BCO2Q9BYV7 579 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 ELOVL4Q9GZR5 314 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 TMEM8AQ9HCN3 771 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 TRPC7Q9HCX4 862 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 GTSE1Q9NYZ3 720 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 MAN1B1Q9UKM7 699 aa19.09■□□□□ 0.65
UPF3A-203ENST00000474056 MRPS17Q9Y2R5 130 aaKnown RBP19.09■□□□□ 0.65
UPF3A-203ENST00000474056 SOBPA7XYQ1 873 aa19.08■□□□□ 0.64
UPF3A-203ENST00000474056 MAN2B1O00754 1011 aa19.08■□□□□ 0.64
UPF3A-203ENST00000474056 EPB41P11171 864 aaKnown RBP19.08■□□□□ 0.64
UPF3A-203ENST00000474056 NDST1P52848 882 aa19.08■□□□□ 0.64
UPF3A-203ENST00000474056 TNK2Q07912 1038 aa19.08■□□□□ 0.64
UPF3A-203ENST00000474056 PAQR9Q6ZVX9 377 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms