RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 C9orf57Q5W0N0 161 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 SCARA3Q6AZY7 606 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 FOXR2Q6PJQ5 311 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 C11orf57Q6ZUT1 292 aaPredicted RBP9.81□□□□□ -0.84
SMC4-213ENST00000472282 CCDC105Q8IYK2 499 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 TCEAL8Q8IYN2 117 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 CSGALNACT2Q8N6G5 542 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 C1orf127Q8N9H9 656 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 PARD3BQ8TEW8 1205 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 CACTINQ8WUQ7 758 aaKnown RBP9.81□□□□□ -0.84
SMC4-213ENST00000472282 NXPE3Q969Y0 559 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 MCRS1Q96EZ8 462 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 MED15Q96RN5 788 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 TMEM209Q96SK2 561 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 TBC1D17Q9HA65 648 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 CYP4F11Q9HBI6 524 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 ARHGEF3Q9NR81 526 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 SLC2A4RGQ9NR83 387 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 ANO10Q9NW15 660 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 CEP72Q9P209 647 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 RWDD2AQ9UIY3 292 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 DNMT3LQ9UJW3 386 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 INSL5Q9Y5Q6 135 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.81□□□□□ -0.84
SMC4-213ENST00000472282 PTPRDP23468 1912 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 GREB1Q4ZG55 1949 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 NCANO14594 1321 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 ANAPC1Q9H1A4 1944 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 ANO9A1A5B4 782 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 SYCE3A1L190 88 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 H7C4K7 107 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 PRRG1O14668 218 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 SLC16A3O15427 465 aaKnown RBP9.8□□□□□ -0.84
SMC4-213ENST00000472282 MOSPD3O75425 235 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 LRG1P02750 347 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 GLULP15104 373 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 GJA1P17302 382 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 PTPN2P17706 415 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 POLR2BP30876 1174 aaKnown RBP9.8□□□□□ -0.84
SMC4-213ENST00000472282 VAMP7P51809 220 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 TYRO3Q06418 890 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 ADCY1Q08828 1119 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 BFSP1Q12934 665 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 DUOXA2Q1HG44 320 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 CCDC40Q4G0X9 1142 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 ZNF280DQ6N043 979 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 INTS8Q75QN2 995 aaKnown RBP9.8□□□□□ -0.84
SMC4-213ENST00000472282 ASCL5Q7RTU5 278 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 TTC9BQ8N6N2 239 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 DTWD2Q8NBA8 298 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 CEP63Q96MT8 703 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 PGLYRP2Q96PD5 576 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 CORO1BQ9BR76 489 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 FOXQ1Q9C009 403 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 DNAJC25Q9H1X3 360 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 DLGAP2Q9P1A6 1054 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 FKBPLQ9UIM3 349 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 SIX4Q9UIU6 781 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 ITGA11Q9UKX5 1188 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 MRPS23Q9Y3D9 190 aaKnown RBP9.8□□□□□ -0.84
SMC4-213ENST00000472282 ZFP37Q9Y6Q3 630 aaPredicted RBP9.8□□□□□ -0.84
SMC4-213ENST00000472282 CACNA1IQ9P0X4 2223 aa9.8□□□□□ -0.84
SMC4-213ENST00000472282 SHISA7A6NL88 538 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 PIRO00625 290 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 OAZ2O95190 189 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 DCNP07585 359 aaKnown RBP9.79□□□□□ -0.84
SMC4-213ENST00000472282 KRT19P08727 400 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 CPB1P15086 417 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 FCARP24071 287 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 ERCC5P28715 1186 aaPredicted RBP9.79□□□□□ -0.84
SMC4-213ENST00000472282 ELF1P32519 619 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 TAF6P49848 677 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 YWHAHQ04917 246 aaPredicted RBP9.79□□□□□ -0.84
SMC4-213ENST00000472282 TWF1Q12792 350 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 BIRC3Q13489 604 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 ANGPT1Q15389 498 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 TPD52L1Q16890 204 aaPredicted RBP9.79□□□□□ -0.84
SMC4-213ENST00000472282 DCAF17Q5H9S7 520 aaPredicted RBP9.79□□□□□ -0.84
SMC4-213ENST00000472282 C1orf220Q5T0J3 134 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 PPP1R26Q5T8A7 1209 aaPredicted RBP9.79□□□□□ -0.84
SMC4-213ENST00000472282 TCERG1LQ5VWI1 586 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 TDRD10Q5VZ19 366 aaKnown RBP9.79□□□□□ -0.84
SMC4-213ENST00000472282 TPGS2Q68CL5 300 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 TANGO2Q6ICL3 276 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 DSTYKQ6XUX3 929 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 TRAPPC11Q7Z392 1133 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 FRMD5Q7Z6J6 570 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 FILIP1Q7Z7B0 1213 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 USP37Q86T82 979 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 CXorf38Q8TB03 319 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 BORCS6Q96GS4 357 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 ZSWIM3Q96MP5 696 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 ZNF560Q96MR9 790 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 RTP3Q9BQQ7 232 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 SRRTQ9BXP5 876 aaKnown RBP9.79□□□□□ -0.84
SMC4-213ENST00000472282 LRRC3Q9BY71 257 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 MMRN2Q9H8L6 949 aa9.79□□□□□ -0.84
SMC4-213ENST00000472282 AVENQ9NQS1 362 aaPredicted RBP9.79□□□□□ -0.84
SMC4-213ENST00000472282 ARMCX3Q9UH62 379 aaPredicted RBP9.79□□□□□ -0.84
SMC4-213ENST00000472282 AFF4Q9UHB7 1163 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms