RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 CXorf40BQ96DE9 158 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 REEP2Q9BRK0 252 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 GTPBP2Q9BX10 602 aaKnown RBP8.93□□□□□ -0.98
CD47-204ENST00000471694 ZFATQ9P243 1243 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 APOBEC2Q9Y235 224 aaKnown RBP8.93□□□□□ -0.98
CD47-204ENST00000471694 SPATA31E1Q6ZUB1 1445 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 CPS1P31327 1500 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 GLI2P10070 1586 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 PLSCR1O15162 318 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 KLRK1P26718 216 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 CDH8P55286 799 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 ELOAQ14241 798 aaKnown RBP8.93□□□□□ -0.98
CD47-204ENST00000471694 INSCQ1MX18 579 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 TBC1D25Q3MII6 688 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 GPAT2Q6NUI2 795 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 MYOCQ99972 504 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 RHBGQ9H310 441 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 JMJD4Q9H9V9 463 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 CLASP2O75122 1294 aaKnown RBP8.93□□□□□ -0.98
CD47-204ENST00000471694 BMP10O95393 424 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 HTR1BP28222 390 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 SEC13P55735 322 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 PSMC6P62333 389 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 PDIA2Q13087 525 aaKnown RBP8.93□□□□□ -0.98
CD47-204ENST00000471694 USP10Q14694 798 aaKnown RBP8.93□□□□□ -0.98
CD47-204ENST00000471694 INAVAQ3KP66 663 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 MIIPQ5JXC2 388 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 TIGD7Q6NT04 549 aaPredicted RBP8.93□□□□□ -0.98
CD47-204ENST00000471694 ZNF655Q8N720 491 aaPredicted RBP8.93□□□□□ -0.98
CD47-204ENST00000471694 KRT35Q92764 455 aa8.93□□□□□ -0.98
CD47-204ENST00000471694 GAKO14976 1311 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 PODXLO00592 558 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 DIAPH2O60879 1101 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 RASGRP1O95267 797 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 TRIM16O95361 564 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 ALPPL2P10696 532 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 RAP1GAPP47736 663 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 GNGT1P63211 74 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 MRPS6P82932 125 aaKnown RBP8.92□□□□□ -0.98
CD47-204ENST00000471694 PTK6Q13882 451 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 ALX1Q15699 326 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 C11orf57Q6ZUT1 292 aaPredicted RBP8.92□□□□□ -0.98
CD47-204ENST00000471694 RASEFQ8IZ41 740 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 DSELQ8IZU8 1212 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 DACH2Q96NX9 599 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 NIF3L1Q9GZT8 377 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 ZMYND12Q9H0C1 365 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 KCND2Q9NZV8 630 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 VPS51Q9UID3 782 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 TOMM70O94826 608 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 PARNO95453 639 aaKnown RBP8.92□□□□□ -0.98
CD47-204ENST00000471694 RPN2P04844 631 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 NFICP08651 508 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 RENBPP51606 427 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 TBX4P57082 545 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 USP41Q3LFD5 358 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 TRIM68Q6AZZ1 485 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 MTHFD1LQ6UB35 978 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 SLC35F6Q8N357 371 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 RSPH9Q9H1X1 276 aaPredicted RBP8.92□□□□□ -0.98
CD47-204ENST00000471694 TRIT1Q9H3H1 467 aaKnown RBP8.92□□□□□ -0.98
CD47-204ENST00000471694 ZNHIT2Q9UHR6 403 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 SNX6Q9UNH7 406 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 VPS9D1Q9Y2B5 631 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 RGS12O14924 1447 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 MOXD2PA6NHM9 499 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 PHF20L1A8MW92 1017 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 IFNA16P05015 189 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 SCP2P22307 547 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 LAMTOR4Q0VGL1 99 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 NT5DC3Q86UY8 548 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 TMA16Q96EY4 203 aaKnown RBP8.92□□□□□ -0.98
CD47-204ENST00000471694 REXO5Q96IC2 774 aaKnown RBP8.92□□□□□ -0.98
CD47-204ENST00000471694 GBP5Q96PP8 586 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 CROCC2H7BZ55 1655 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 INPP4BO15327 924 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 ADH1CP00326 375 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 NAMPTP43490 491 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 ELF2Q15723 593 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 MARK2Q7KZI7 788 aaKnown RBP8.92□□□□□ -0.98
CD47-204ENST00000471694 COMMD2Q86X83 199 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 CCDC60Q8IWA6 550 aaPredicted RBP8.92□□□□□ -0.98
CD47-204ENST00000471694 LINC00301Q8NCQ3 95 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 TRPM4Q8TD43 1214 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 COG1Q8WTW3 980 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 CLIP3Q96DZ5 547 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 AGPAT1Q99943 283 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 BAIAP2L1Q9UHR4 511 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 SF3B1O75533 1304 aaKnown RBP eCLIP8.92□□□□□ -0.983e-6■■■■□ 20.7
CD47-204ENST00000471694 F8W810 466 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 HS6ST1O60243 411 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 TIPRLO75663 272 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 LUC7L3O95232 432 aaKnown RBP8.92□□□□□ -0.98
CD47-204ENST00000471694 STAU1O95793 577 aaKnown RBP8.92□□□□□ -0.98
CD47-204ENST00000471694 ANXA5P08758 320 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 DHPSP49366 369 aaPredicted RBP8.92□□□□□ -0.98
CD47-204ENST00000471694 FAXCQ5TGI0 409 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 ZNF557Q8N988 423 aaPredicted RBP8.92□□□□□ -0.98
CD47-204ENST00000471694 ZSCAN1Q8NBB4 408 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 VPS37AQ8NEZ2 397 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms