RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 TMEM150AQ86TG1 271 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 ZNF677Q86XU0 584 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 PHF13Q86YI8 300 aaPredicted RBP10.49□□□□□ -0.73
SF3A1-207ENST00000471342 CCDC150Q8NCX0 1101 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 STKLD1Q8NE28 680 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 ACRBPQ8NEB7 543 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 GDPD5Q8WTR4 605 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 SECISBP2LQ93073 1101 aaKnown RBP10.49□□□□□ -0.73
SF3A1-207ENST00000471342 ARHGEF26Q96DR7 871 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 TMEM169Q96HH4 297 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 HEXIM2Q96MH2 286 aaKnown RBP10.49□□□□□ -0.73
SF3A1-207ENST00000471342 SAMD11Q96NU1 681 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 EIF3CQ99613 913 aaKnown RBP10.49□□□□□ -0.73
SF3A1-207ENST00000471342 BAG1Q99933 345 aaPredicted RBP10.49□□□□□ -0.73
SF3A1-207ENST00000471342 DUSP16Q9BY84 665 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 UBXN6Q9BZV1 441 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 SNX25Q9H3E2 840 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 KCND1Q9NSA2 647 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 ADGRG1Q9Y653 693 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 CDY1Q9Y6F8 540 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 EPN1Q9Y6I3 576 aaPredicted RBP10.49□□□□□ -0.73
SF3A1-207ENST00000471342 USP3Q9Y6I4 520 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.49□□□□□ -0.73
SF3A1-207ENST00000471342 USP27XA6NNY8 438 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 C2CD2LO14523 706 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 THAP12O43422 761 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 NDUFA10O95299 355 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 CXCL14O95715 111 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 GLP2RO95838 553 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 ERBB2P04626 1255 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 HAPLN1P10915 354 aaPredicted RBP10.48□□□□□ -0.73
SF3A1-207ENST00000471342 GZMAP12544 262 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 ATF2P15336 505 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 BDNFP23560 247 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 ANXA13P27216 316 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 MAGEA11P43364 429 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 NDUFV1P49821 464 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 KIF11P52732 1056 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 USP46P62068 366 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 GPM6BQ13491 265 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 EIF4EBP2Q13542 120 aaPredicted RBP10.48□□□□□ -0.73
SF3A1-207ENST00000471342 BMS1Q14692 1282 aaKnown RBP10.48□□□□□ -0.73
SF3A1-207ENST00000471342 TCEAL1Q15170 157 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 GOLGA7BQ2TAP0 167 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 SLC39A12Q504Y0 691 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 SGO2Q562F6 1265 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 PM20D1Q6GTS8 502 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 ACAD10Q6JQN1 1059 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 CPNE8Q86YQ8 564 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 TMTC1Q8IUR5 882 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 PASD1Q8IV76 773 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 TTC39CQ8N584 583 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 C1orf131Q8NDD1 294 aaKnown RBP10.48□□□□□ -0.73
SF3A1-207ENST00000471342 ZNF461Q8TAF7 563 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 CLEC4CQ8WTT0 213 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 STK32AQ8WU08 396 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 CPA5Q8WXQ8 436 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 NDRG1Q92597 394 aaKnown RBP10.48□□□□□ -0.73
SF3A1-207ENST00000471342 PGLYRP2Q96PD5 576 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 TCF25Q9BQ70 676 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 TRIM7Q9C029 511 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 AAASQ9NRG9 546 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 CALCOCO1Q9P1Z2 691 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 CHORDC1Q9UHD1 332 aaPredicted RBP10.48□□□□□ -0.73
SF3A1-207ENST00000471342 COG5Q9UP83 839 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 SLC27A5Q9Y2P5 690 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 RWDD3Q9Y3V2 267 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 BZW2Q9Y6E2 419 aaKnown RBP10.48□□□□□ -0.73
SF3A1-207ENST00000471342 DUSP10Q9Y6W6 482 aa10.48□□□□□ -0.73
SF3A1-207ENST00000471342 PTPRDP23468 1912 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 CARNS1A5YM72 827 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 PJA2O43164 708 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 PAPSS1O43252 624 aaPredicted RBP10.47□□□□□ -0.73
SF3A1-207ENST00000471342 MOSPD3O75425 235 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 TADA3O75528 432 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 C1RP00736 705 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 PCSK1P29120 753 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 USP8P40818 1118 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 PLA2G4AP47712 749 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 GSCP56915 257 aaPredicted RBP10.47□□□□□ -0.73
SF3A1-207ENST00000471342 BPIFB4P59827 614 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 ZNF252P-AS1Q0IIN9 211 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 DUSP4Q13115 394 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 MTMR3Q13615 1198 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 SPOUT1Q5T280 376 aaKnown RBP10.47□□□□□ -0.73
SF3A1-207ENST00000471342 SDHAF4Q5VUM1 108 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 OTUD1Q5VV17 481 aaPredicted RBP10.47□□□□□ -0.73
SF3A1-207ENST00000471342 PPP2R2DQ66LE6 453 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 ZNF280DQ6N043 979 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 CYP26C1Q6V0L0 522 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 ZNF662Q6ZS27 426 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 BNIPLQ7Z465 357 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 SCD5Q86SK9 330 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 PIGZQ86VD9 579 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 XYLT1Q86Y38 959 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 TCEAL8Q8IYN2 117 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 CCDC170Q8IYT3 715 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 MCOLN2Q8IZK6 566 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 ARFGAP1Q8N6T3 406 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 KIAA1524Q8TCG1 905 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms