RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 TMEM173Q86WV6 379 aaPredicted RBP18.49■□□□□ 0.55
HSPG2-208ENST00000471322 PASD1Q8IV76 773 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 RASGEF1CQ8N431 466 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 MS4A14Q96JA4 679 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 RHOXF2Q9BQY4 288 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 C11orf84Q9BUA3 381 aaPredicted RBP18.49■□□□□ 0.55
HSPG2-208ENST00000471322 SDCBP2Q9H190 292 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 AAASQ9NRG9 546 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 PARVAQ9NVD7 372 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 RWDD3Q9Y3V2 267 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 C5orf42Q9H799 3197 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 ANK1P16157 1881 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 CCDC151A5D8V7 595 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 C5orf67F2Z3F1 127 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 MYO1FO00160 1098 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 DDX3YO15523 660 aaKnown RBP18.49■□□□□ 0.55
HSPG2-208ENST00000471322 ATMINO43313 823 aaPredicted RBP18.49■□□□□ 0.55
HSPG2-208ENST00000471322 ERLIN1O75477 346 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 FGF18O76093 207 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 CFHP08603 1231 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 VDRP11473 427 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 COMTP21964 271 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 DNAJB1P25685 340 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 RAP1GAPP47736 663 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 ALDH7A1P49419 539 aaKnown RBP18.49■□□□□ 0.55
HSPG2-208ENST00000471322 C2orf54Q08AI8 447 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 C9orf57Q5W0N0 161 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 PLEKHA7Q6IQ23 1121 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 WDR93Q6P2C0 686 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 TMCO3Q6UWJ1 677 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 TFAP2BQ92481 460 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 ZNF560Q96MR9 790 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 ZNF558Q96NG5 402 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 FAM193BQ96PV7 902 aaPredicted RBP18.49■□□□□ 0.55
HSPG2-208ENST00000471322 MTCH2Q9Y6C9 303 aa18.49■□□□□ 0.55
HSPG2-208ENST00000471322 CCDC66A2RUB6 948 aa18.48■□□□□ 0.55
HSPG2-208ENST00000471322 F8W810 466 aa18.48■□□□□ 0.55
HSPG2-208ENST00000471322 SPOPO43791 374 aa18.48■□□□□ 0.55
HSPG2-208ENST00000471322 SLC11A1P49279 550 aa18.48■□□□□ 0.55
HSPG2-208ENST00000471322 PTP4A2Q12974 167 aa18.48■□□□□ 0.55
HSPG2-208ENST00000471322 STILQ15468 1287 aa18.48■□□□□ 0.55
HSPG2-208ENST00000471322 MMS22LQ6ZRQ5 1243 aa18.48■□□□□ 0.55
HSPG2-208ENST00000471322 SLC4A11Q8NBS3 891 aa18.48■□□□□ 0.55
HSPG2-208ENST00000471322 WHAMMQ8TF30 809 aa18.48■□□□□ 0.55
HSPG2-208ENST00000471322 C11orf70Q9BRQ4 267 aa18.48■□□□□ 0.55
HSPG2-208ENST00000471322 PLVAPQ9BX97 442 aa18.48■□□□□ 0.55
HSPG2-208ENST00000471322 NT5C1AQ9BXI3 368 aa18.48■□□□□ 0.55
HSPG2-208ENST00000471322 EPC1Q9H2F5 836 aa18.48■□□□□ 0.55
HSPG2-208ENST00000471322 KANSL3Q9P2N6 904 aa18.48■□□□□ 0.55
HSPG2-208ENST00000471322 TUBGCP4Q9UGJ1 667 aa18.48■□□□□ 0.55
HSPG2-208ENST00000471322 ANAPC7Q9UJX3 599 aa18.48■□□□□ 0.55
HSPG2-208ENST00000471322 STRIP2Q9ULQ0 834 aa18.48■□□□□ 0.55
HSPG2-208ENST00000471322 PRG3Q9Y2Y8 225 aaPredicted RBP18.48■□□□□ 0.55
HSPG2-208ENST00000471322 FAM170AA1A519 330 aa18.47■□□□□ 0.55
HSPG2-208ENST00000471322 TMEM110-MUSTN1A8MSY1 372 aa18.47■□□□□ 0.55
HSPG2-208ENST00000471322 PIRO00625 290 aa18.47■□□□□ 0.55
HSPG2-208ENST00000471322 PTGESO14684 152 aa18.47■□□□□ 0.55
HSPG2-208ENST00000471322 RB1P06400 928 aa18.47■□□□□ 0.55
HSPG2-208ENST00000471322 GALTP07902 379 aa18.47■□□□□ 0.55
HSPG2-208ENST00000471322 CTNNA2P26232 953 aa18.47■□□□□ 0.55
HSPG2-208ENST00000471322 OR1G1P47890 313 aa18.47■□□□□ 0.55
HSPG2-208ENST00000471322 CLCN6P51797 869 aa18.47■□□□□ 0.55
HSPG2-208ENST00000471322 MAMLD1Q13495 774 aa18.47■□□□□ 0.55
HSPG2-208ENST00000471322 CNGA2Q16280 664 aa18.47■□□□□ 0.55
HSPG2-208ENST00000471322 ERICH1Q86X53 443 aa18.47■□□□□ 0.55
HSPG2-208ENST00000471322 BCL7CQ8WUZ0 217 aaPredicted RBP18.47■□□□□ 0.55
HSPG2-208ENST00000471322 POF1BQ8WVV4 589 aa18.47■□□□□ 0.55
HSPG2-208ENST00000471322 HNRNPLLQ8WVV9 542 aaKnown RBP18.47■□□□□ 0.55
HSPG2-208ENST00000471322 C18orf25Q96B23 403 aaPredicted RBP18.47■□□□□ 0.55
HSPG2-208ENST00000471322 ZSWIM1Q9BR11 485 aa18.47■□□□□ 0.55
HSPG2-208ENST00000471322 ELOVL4Q9GZR5 314 aa18.47■□□□□ 0.55
HSPG2-208ENST00000471322 SLC38A7Q9NVC3 462 aa18.47■□□□□ 0.55
HSPG2-208ENST00000471322 CHORDC1Q9UHD1 332 aaPredicted RBP18.47■□□□□ 0.55
HSPG2-208ENST00000471322 RALGAPA2Q2PPJ7 1873 aa18.47■□□□□ 0.55
HSPG2-208ENST00000471322 CASTOR2A6NHX0 329 aa18.46■□□□□ 0.55
HSPG2-208ENST00000471322 CCDC188H7C350 402 aa18.46■□□□□ 0.55
HSPG2-208ENST00000471322 PPP2R5EQ16537 467 aa18.46■□□□□ 0.55
HSPG2-208ENST00000471322 PTPROQ16827 1216 aa18.46■□□□□ 0.55
HSPG2-208ENST00000471322 SGO2Q562F6 1265 aa18.46■□□□□ 0.55
HSPG2-208ENST00000471322 UNC93AQ86WB7 457 aa18.46■□□□□ 0.55
HSPG2-208ENST00000471322 MAFAQ8NHW3 353 aaPredicted RBP18.46■□□□□ 0.55
HSPG2-208ENST00000471322 SPPL3Q8TCT6 385 aa18.46■□□□□ 0.55
HSPG2-208ENST00000471322 CD101Q93033 1021 aa18.46■□□□□ 0.55
HSPG2-208ENST00000471322 HEXIM2Q96MH2 286 aaKnown RBP18.46■□□□□ 0.55
HSPG2-208ENST00000471322 PAAF1Q9BRP4 392 aa18.46■□□□□ 0.55
HSPG2-208ENST00000471322 ARFGAP3Q9NP61 516 aa18.46■□□□□ 0.55
HSPG2-208ENST00000471322 TMEM59LQ9UK28 342 aa18.46■□□□□ 0.55
HSPG2-208ENST00000471322 PCDHA3Q9Y5H8 950 aa18.46■□□□□ 0.55
HSPG2-208ENST00000471322 SNX9Q9Y5X1 595 aa18.46■□□□□ 0.55
HSPG2-208ENST00000471322 FAM163BP0C2L3 166 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 CTNNA1P35221 906 aaKnown RBP18.45■□□□□ 0.54
HSPG2-208ENST00000471322 IRS1P35568 1242 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 NDST1P52848 882 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 CAMK1Q14012 370 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 COLGALT2Q8IYK4 626 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 TMEM130Q8N3G9 435 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 C1orf131Q8NDD1 294 aaKnown RBP18.45■□□□□ 0.54
HSPG2-208ENST00000471322 MIS12Q9H081 205 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 GOLGA2P5Q9HBQ8 144 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 RBM12Q9NTZ6 932 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms