RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 MAPRE1Q15691 268 aaKnown RBP11.92□□□□□ -0.5
SREBF1-209ENST00000470247 SLC18A3Q16572 532 aa11.92□□□□□ -0.5
SREBF1-209ENST00000470247 CLEC16AQ2KHT3 1053 aa11.92□□□□□ -0.5
SREBF1-209ENST00000470247 CFAP221Q4G0U5 840 aa11.92□□□□□ -0.5
SREBF1-209ENST00000470247 TPGS2Q68CL5 300 aa11.92□□□□□ -0.5
SREBF1-209ENST00000470247 TRIM72Q6ZMU5 477 aa11.92□□□□□ -0.5
SREBF1-209ENST00000470247 CLEC20AQ6ZU45 233 aa11.92□□□□□ -0.5
SREBF1-209ENST00000470247 PASD1Q8IV76 773 aa11.92□□□□□ -0.5
SREBF1-209ENST00000470247 CCDC170Q8IYT3 715 aa11.92□□□□□ -0.5
SREBF1-209ENST00000470247 CCDC112Q8NEF3 446 aa11.92□□□□□ -0.5
SREBF1-209ENST00000470247 GDPD5Q8WTR4 605 aa11.92□□□□□ -0.5
SREBF1-209ENST00000470247 SECISBP2LQ93073 1101 aaKnown RBP11.92□□□□□ -0.5
SREBF1-209ENST00000470247 FUBP3Q96I24 572 aaKnown RBP eCLIP11.92□□□□□ -0.5
SREBF1-209ENST00000470247 CCDC42Q96M95 316 aa11.92□□□□□ -0.5
SREBF1-209ENST00000470247 KCNK16Q96T55 309 aa11.92□□□□□ -0.5
SREBF1-209ENST00000470247 ISCUQ9H1K1 167 aa11.92□□□□□ -0.5
SREBF1-209ENST00000470247 ENTPD7Q9NQZ7 604 aa11.92□□□□□ -0.5
SREBF1-209ENST00000470247 SPTLC3Q9NUV7 552 aa11.92□□□□□ -0.5
SREBF1-209ENST00000470247 AFF4Q9UHB7 1163 aaKnown RBP11.92□□□□□ -0.5
SREBF1-209ENST00000470247 NAGPAQ9UK23 515 aa11.92□□□□□ -0.5
SREBF1-209ENST00000470247 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.91□□□□□ -0.5
SREBF1-209ENST00000470247 EIF3CLB5ME19 914 aaKnown RBP11.91□□□□□ -0.5
SREBF1-209ENST00000470247 M0QYV0 167 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 ARHGAP6O43182 974 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 CSPG5O95196 566 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 NDUFA10O95299 355 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 LSM8O95777 96 aaKnown RBP11.91□□□□□ -0.5
SREBF1-209ENST00000470247 HAPLN1P10915 354 aaPredicted RBP11.91□□□□□ -0.5
SREBF1-209ENST00000470247 CPB1P15086 417 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 ATF2P15336 505 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 NPR3P17342 541 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 MAGEA11P43364 429 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 NDUFV1P49821 464 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 BCAT1P54687 386 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 CENPCQ03188 943 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 ADCY1Q08828 1119 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 PTP4A2Q12974 167 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 DUSP4Q13115 394 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 NAA35Q5VZE5 725 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 ACAD10Q6JQN1 1059 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 PDE12Q6L8Q7 609 aaKnown RBP11.91□□□□□ -0.5
SREBF1-209ENST00000470247 PMF1Q6P1K2 205 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 ALKBH5Q6P6C2 394 aaKnown RBP11.91□□□□□ -0.5
SREBF1-209ENST00000470247 C4orf50Q6ZRC1 276 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 ADGRD2Q7Z7M1 963 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 SPATA2LQ8IUW3 424 aaPredicted RBP11.91□□□□□ -0.5
SREBF1-209ENST00000470247 C1orf131Q8NDD1 294 aaKnown RBP11.91□□□□□ -0.5
SREBF1-209ENST00000470247 MICAL1Q8TDZ2 1067 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 CPA5Q8WXQ8 436 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 SMARCD1Q96GM5 515 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 EIF3CQ99613 913 aaKnown RBP11.91□□□□□ -0.5
SREBF1-209ENST00000470247 MED10Q9BTT4 135 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.91□□□□□ -0.5
SREBF1-209ENST00000470247 SLC4A5Q9BY07 1137 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 DNAI2Q9GZS0 605 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 ABCB6Q9NP58 842 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 KRT82Q9NSB4 513 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 ABI2Q9NYB9 513 aaPredicted RBP11.91□□□□□ -0.5
SREBF1-209ENST00000470247 TJP2Q9UDY2 1190 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 SLC27A5Q9Y2P5 690 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 PCDHB5Q9Y5E4 795 aa11.91□□□□□ -0.5
SREBF1-209ENST00000470247 PTPRDP23468 1912 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 FAM170AA1A519 330 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 XPO1O14980 1071 aaKnown RBP11.9□□□□□ -0.5
SREBF1-209ENST00000470247 TGM5O43548 720 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 AKR1B10O60218 316 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 CLASP2O75122 1294 aaKnown RBP11.9□□□□□ -0.5
SREBF1-209ENST00000470247 AP1G2O75843 785 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 FAM200BP0CF97 657 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 SETSIPP0DME0 302 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 PLA2G4AP47712 749 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 GPR15P49685 360 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 MAP3K7CLP57077 242 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 CREMQ03060 361 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 BST2Q10589 180 aaKnown RBP11.9□□□□□ -0.5
SREBF1-209ENST00000470247 PTPN20Q4JDL3 420 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 CCDC122Q5T0U0 273 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 VSTM1Q6UX27 236 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 TOGARAM2Q6ZUX3 1019 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 MON1BQ7L1V2 547 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 TMEM110Q86TL2 294 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 PIGZQ86VD9 579 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 PHF13Q86YI8 300 aaPredicted RBP11.9□□□□□ -0.5
SREBF1-209ENST00000470247 TMEM35BQ8NCS4 154 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 ACRBPQ8NEB7 543 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 SPPL2BQ8TCT7 592 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 STK32AQ8WU08 396 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 C2orf15Q8WU43 125 aaKnown RBP11.9□□□□□ -0.5
SREBF1-209ENST00000470247 SLC22A17Q8WUG5 538 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 MRPL38Q96DV4 380 aaKnown RBP11.9□□□□□ -0.5
SREBF1-209ENST00000470247 C8orf48Q96LL4 319 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 CPXM1Q96SM3 734 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 UBXN6Q9BZV1 441 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 HSFX1Q9UBD0 423 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 HESX1Q9UBX0 185 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 ADGRG1Q9Y653 693 aa11.9□□□□□ -0.5
SREBF1-209ENST00000470247 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.9□□□□□ -0.5
SREBF1-209ENST00000470247 TMEM265A0A087WTH1 108 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 A0A0U1RQJ8 604 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 RCCD1A6NED2 376 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms