RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 TMEM30AQ9NV96 361 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 CTTNBP2NLQ9P2B4 639 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 KIAA1671Q9BY89 1806 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 TCRBV5S1A1TA0A578 114 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 PIK3R2O00459 728 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 TUBB4AP04350 444 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 CALB1P05937 261 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 SETSIPP0DME0 302 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 RABGGTBP53611 331 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 CACNA2D1P54289 1103 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 TSPY1Q01534 308 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 MAMLD1Q13495 774 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 USP41Q3LFD5 358 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 SLC39A12Q504Y0 691 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 LIN9Q5TKA1 542 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 PLEKHA7Q6IQ23 1121 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 PRSS55Q6UWB4 352 aaPredicted RBP13.55□□□□□ -0.24
RUNX1-213ENST00000469087 CLEC20AQ6ZU45 233 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 TMEM110Q86TL2 294 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 FAM35AQ86V20 835 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 TPCN2Q8NHX9 752 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 SP7Q8TDD2 431 aaPredicted RBP13.55□□□□□ -0.24
RUNX1-213ENST00000469087 STK32AQ8WU08 396 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 ZNF592Q92610 1267 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 CLP1Q92989 425 aaKnown RBP13.55□□□□□ -0.24
RUNX1-213ENST00000469087 TMEM169Q96HH4 297 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 SMOQ99835 787 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 MTIF3Q9H2K0 278 aaKnown RBP13.55□□□□□ -0.24
RUNX1-213ENST00000469087 AVENQ9NQS1 362 aaPredicted RBP13.55□□□□□ -0.24
RUNX1-213ENST00000469087 PCDHGC5Q9Y5F6 944 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 NLRC5Q86WI3 1866 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 GRXCR1A8MXD5 290 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 E5RJQ4 531 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 KIF2AO00139 706 aaPredicted RBP13.55□□□□□ -0.24
RUNX1-213ENST00000469087 PALMO75781 387 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 GJB6O95452 261 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 SOD2P04179 222 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 BDNFP23560 247 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 RPL34P49207 117 aaKnown RBP13.55□□□□□ -0.24
RUNX1-213ENST00000469087 HADHBP55084 474 aaKnown RBP13.55□□□□□ -0.24
RUNX1-213ENST00000469087 MAP3K7CLP57077 242 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 MAPRE1Q15691 268 aaKnown RBP13.55□□□□□ -0.24
RUNX1-213ENST00000469087 DNTTIP2Q5QJE6 756 aaKnown RBP13.55□□□□□ -0.24
RUNX1-213ENST00000469087 FAM109BQ6ICB4 259 aaPredicted RBP13.55□□□□□ -0.24
RUNX1-213ENST00000469087 ZNF280DQ6N043 979 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 ANKS3Q6ZW76 656 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 DDX53Q86TM3 631 aaKnown RBP13.55□□□□□ -0.24
RUNX1-213ENST00000469087 SCUBE3Q8IX30 993 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 ZMIZ2Q8NF64 920 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 TRIM58Q8NG06 486 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 GOLPH3Q9H4A6 298 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 AAASQ9NRG9 546 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 KRT82Q9NSB4 513 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 UVRAGQ9P2Y5 699 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 PCDHB12Q9Y5F1 795 aa13.55□□□□□ -0.24
RUNX1-213ENST00000469087 GRID2IPA4D2P6 1211 aa13.54□□□□□ -0.24
RUNX1-213ENST00000469087 OR6C75A6NL08 312 aa13.54□□□□□ -0.24
RUNX1-213ENST00000469087 H7C4K7 107 aa13.54□□□□□ -0.24
RUNX1-213ENST00000469087 XPO1O14980 1071 aaKnown RBP13.54□□□□□ -0.24
RUNX1-213ENST00000469087 BUB1BO60566 1050 aaPredicted RBP13.54□□□□□ -0.24
RUNX1-213ENST00000469087 AP1G2O75843 785 aa13.54□□□□□ -0.24
RUNX1-213ENST00000469087 MTA2O94776 668 aa13.54□□□□□ -0.24
RUNX1-213ENST00000469087 FAM200BP0CF97 657 aa13.54□□□□□ -0.24
RUNX1-213ENST00000469087 NPR3P17342 541 aa13.54□□□□□ -0.24
RUNX1-213ENST00000469087 PLA2G4AP47712 749 aa13.54□□□□□ -0.24
RUNX1-213ENST00000469087 ZNF268Q14587 947 aaPredicted RBP13.54□□□□□ -0.24
RUNX1-213ENST00000469087 PIGZQ86VD9 579 aa13.54□□□□□ -0.24
RUNX1-213ENST00000469087 XYLT1Q86Y38 959 aa13.54□□□□□ -0.24
RUNX1-213ENST00000469087 DCP1BQ8IZD4 617 aaKnown RBP13.54□□□□□ -0.24
RUNX1-213ENST00000469087 LRRC57Q8N9N7 239 aa13.54□□□□□ -0.24
RUNX1-213ENST00000469087 ZNF564Q8TBZ8 553 aaPredicted RBP13.54□□□□□ -0.24
RUNX1-213ENST00000469087 RIN2Q8WYP3 895 aaPredicted RBP13.54□□□□□ -0.24
RUNX1-213ENST00000469087 BTBD6Q96KE9 485 aa13.54□□□□□ -0.24
RUNX1-213ENST00000469087 TRIM7Q9C029 511 aa13.54□□□□□ -0.24
RUNX1-213ENST00000469087 SYNCQ9H7C4 482 aa13.54□□□□□ -0.24
RUNX1-213ENST00000469087 CSNK1G1Q9HCP0 422 aa13.54□□□□□ -0.24
RUNX1-213ENST00000469087 PARVAQ9NVD7 372 aa13.54□□□□□ -0.24
RUNX1-213ENST00000469087 STRIP2Q9ULQ0 834 aa13.54□□□□□ -0.24
RUNX1-213ENST00000469087 CARNS1A5YM72 827 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 C2CD2LO14523 706 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 ENC1O14682 589 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 ADAM12O43184 909 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 FGF18O76093 207 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 MYOGP15173 224 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 CYP2F1P24903 491 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 ARPP19P56211 112 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 SLC8A3P57103 927 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 RPL7AP62424 266 aaKnown RBP13.53□□□□□ -0.24
RUNX1-213ENST00000469087 IFI16Q16666 785 aaKnown RBP13.53□□□□□ -0.24
RUNX1-213ENST00000469087 PPP1R15BQ5SWA1 713 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 KIAA1841Q6NSI8 718 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 SLFN11Q7Z7L1 901 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 SPATA2LQ8IUW3 424 aaPredicted RBP13.53□□□□□ -0.24
RUNX1-213ENST00000469087 KLHL23Q8NBE8 558 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 MSANTD4Q8NCY6 345 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 C3orf20Q8ND61 904 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 PIK3R5Q8WYR1 880 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 MCRS1Q96EZ8 462 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 SMARCD1Q96GM5 515 aa13.53□□□□□ -0.24
RUNX1-213ENST00000469087 HSFY1Q96LI6 401 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms