RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 COBLL1Q53SF7 1204 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 KLHL10Q6JEL2 608 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 VSTM1Q6UX27 236 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 CMTM8Q8IZV2 173 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 DTWD2Q8NBA8 298 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 TTC16Q8NEE8 873 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 DEPDC1BQ8WUY9 529 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 MRPS31Q92665 395 aaKnown RBP12.3□□□□□ -0.44
CDHR3-205ENST00000468143 TAF4BQ92750 862 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 SEMA4DQ92854 862 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 ATOH1Q92858 354 aaPredicted RBP12.3□□□□□ -0.44
CDHR3-205ENST00000468143 IRF7Q92985 503 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 E2F7Q96AV8 911 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 CYP2S1Q96SQ9 504 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 MED10Q9BTT4 135 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 TRPC7Q9HCX4 862 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 TMEM30AQ9NV96 361 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 HMGXB4Q9UGU5 601 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 TADA3O75528 432 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 P4HA1P13674 534 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 GLULP15104 373 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 BMP6P22004 513 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 AVPR1AP37288 418 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 SOX9P48436 509 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 NUBP1P53384 320 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 FKBP3Q00688 224 aaKnown RBP12.29□□□□□ -0.44
CDHR3-205ENST00000468143 IFRD2Q12894 506 aaPredicted RBP12.29□□□□□ -0.44
CDHR3-205ENST00000468143 CAMK4Q16566 473 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 DCAF17Q5H9S7 520 aaPredicted RBP12.29□□□□□ -0.44
CDHR3-205ENST00000468143 TCERG1LQ5VWI1 586 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 PAQR9Q6ZVX9 377 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 ALYREFQ86V81 257 aaKnown RBP12.29□□□□□ -0.44
CDHR3-205ENST00000468143 MON1AQ86VX9 555 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 ELOA2Q8IYF1 753 aaPredicted RBP12.29□□□□□ -0.44
CDHR3-205ENST00000468143 CCDC105Q8IYK2 499 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 PJA1Q8NG27 643 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 BPIFB1Q8TDL5 484 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 DNASE1L2Q92874 299 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 TRMT2BQ96GJ1 504 aaKnown RBP12.29□□□□□ -0.44
CDHR3-205ENST00000468143 SPATA17Q96L03 361 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 C8orf48Q96LL4 319 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 MYRFLQ96LU7 910 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 KCNK16Q96T55 309 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 DDX23Q9BUQ8 820 aaKnown RBP12.29□□□□□ -0.44
CDHR3-205ENST00000468143 TMEM8AQ9HCN3 771 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 UXTQ9UBK9 157 aaPredicted RBP12.29□□□□□ -0.44
CDHR3-205ENST00000468143 NDRG2Q9UN36 371 aaKnown RBP12.29□□□□□ -0.44
CDHR3-205ENST00000468143 CCL26Q9Y258 94 aa12.29□□□□□ -0.44
CDHR3-205ENST00000468143 KMT2EQ8IZD2 1858 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 C2orf78A6NCI8 922 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 SHISA7A6NL88 538 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 PPP1R3GB7ZBB8 358 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 PSMA7O14818 248 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 TRIM66O15016 1216 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 CHADO15335 359 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 ABL1P00519 1130 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 CCDC130P13994 396 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 CD58P19256 250 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 CCNE1P24864 410 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 TARSP26639 723 aaKnown RBP12.28□□□□□ -0.44
CDHR3-205ENST00000468143 GTF2H1P32780 548 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 KPNA1P52294 538 aaPredicted RBP12.28□□□□□ -0.44
CDHR3-205ENST00000468143 STX17P56962 302 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 UBE2HP62256 183 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 NOP14P78316 857 aaKnown RBP12.28□□□□□ -0.44
CDHR3-205ENST00000468143 TNK2Q07912 1038 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 FCHO2Q0JRZ9 810 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 STIM1Q13586 685 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 MORC3Q14149 939 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 KRT39Q6A163 491 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 ZNF852Q6ZMS4 543 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 DENND5BQ6ZUT9 1274 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 CELF5Q8N6W0 485 aaKnown RBP12.28□□□□□ -0.44
CDHR3-205ENST00000468143 ARL14EPQ8N8R7 260 aaPredicted RBP12.28□□□□□ -0.44
CDHR3-205ENST00000468143 C12orf29Q8N999 325 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 CSGALNACT1Q8TDX6 532 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 USP13Q92995 863 aaPredicted RBP12.28□□□□□ -0.44
CDHR3-205ENST00000468143 DHTKD1Q96HY7 919 aaPredicted RBP12.28□□□□□ -0.44
CDHR3-205ENST00000468143 TNIP3Q96KP6 325 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 TWNKQ96RR1 684 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 SLC22A12Q96S37 553 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 IMPG2Q9BZV3 1241 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 ELOVL4Q9GZR5 314 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 LTB4R2Q9NPC1 389 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 GKN1Q9NS71 199 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 FAM49BQ9NUQ9 324 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 TDP1Q9NUW8 608 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 RAB20Q9NX57 234 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 GTSE1Q9NYZ3 720 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 DLGAP2Q9P1A6 1054 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 PIAS3Q9Y6X2 628 aa12.28□□□□□ -0.44
CDHR3-205ENST00000468143 ARNTLO00327 626 aa12.27□□□□□ -0.45
CDHR3-205ENST00000468143 BEST1O76090 585 aa12.27□□□□□ -0.45
CDHR3-205ENST00000468143 DDX6P26196 483 aaKnown RBP eCLIP12.27□□□□□ -0.45
CDHR3-205ENST00000468143 ADORA2BP29275 332 aa12.27□□□□□ -0.45
CDHR3-205ENST00000468143 WEE1P30291 646 aa12.27□□□□□ -0.45
CDHR3-205ENST00000468143 MXI1P50539 228 aa12.27□□□□□ -0.45
CDHR3-205ENST00000468143 MCCD1P59942 119 aaPredicted RBP12.27□□□□□ -0.45
CDHR3-205ENST00000468143 LRRC63Q05C16 580 aa12.27□□□□□ -0.45
CDHR3-205ENST00000468143 ANGPT1Q15389 498 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms