RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 PDE4CQ08493 712 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 STILQ15468 1287 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 ACAD10Q6JQN1 1059 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 RNF19BQ6ZMZ0 732 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 TMC7Q7Z402 723 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 KIAA1328Q86T90 577 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 DCP1BQ8IZD4 617 aaKnown RBP18.22■□□□□ 0.51
PTPRU-206ENST00000465525 TTC9BQ8N6N2 239 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 TMEM35BQ8NCS4 154 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 CLSTN3Q9BQT9 956 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 OXCT2Q9BYC2 517 aaPredicted RBP18.22■□□□□ 0.51
PTPRU-206ENST00000465525 MRPL17Q9NRX2 175 aaKnown RBP18.22■□□□□ 0.51
PTPRU-206ENST00000465525 TMEM30AQ9NV96 361 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 TJP2Q9UDY2 1190 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 CEP83Q9Y592 693 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 ATG2AQ2TAZ0 1938 aa18.21■□□□□ 0.51
PTPRU-206ENST00000465525 AP1G2O75843 785 aa18.21■□□□□ 0.51
PTPRU-206ENST00000465525 LSM8O95777 96 aaKnown RBP18.21■□□□□ 0.51
PTPRU-206ENST00000465525 ABL1P00519 1130 aa18.21■□□□□ 0.51
PTPRU-206ENST00000465525 GPD2P43304 727 aa18.21■□□□□ 0.51
PTPRU-206ENST00000465525 NSFP46459 744 aaKnown RBP18.21■□□□□ 0.51
PTPRU-206ENST00000465525 GALCP54803 685 aa18.21■□□□□ 0.51
PTPRU-206ENST00000465525 PKDCCQ504Y2 493 aa18.21■□□□□ 0.51
PTPRU-206ENST00000465525 LLGL2Q6P1M3 1020 aa18.21■□□□□ 0.51
PTPRU-206ENST00000465525 MMS22LQ6ZRQ5 1243 aa18.21■□□□□ 0.51
PTPRU-206ENST00000465525 SPATA2LQ8IUW3 424 aaPredicted RBP18.21■□□□□ 0.51
PTPRU-206ENST00000465525 ANKRD52Q8NB46 1076 aa18.21■□□□□ 0.51
PTPRU-206ENST00000465525 KIAA1524Q8TCG1 905 aa18.21■□□□□ 0.51
PTPRU-206ENST00000465525 C11orf70Q9BRQ4 267 aa18.21■□□□□ 0.51
PTPRU-206ENST00000465525 LMAN2LQ9H0V9 348 aa18.21■□□□□ 0.51
PTPRU-206ENST00000465525 LHX5Q9H2C1 402 aa18.21■□□□□ 0.51
PTPRU-206ENST00000465525 NGRNQ9NPE2 291 aaKnown RBP18.21■□□□□ 0.51
PTPRU-206ENST00000465525 TLR9Q9NR96 1032 aa18.21■□□□□ 0.51
PTPRU-206ENST00000465525 TRIM10Q9UDY6 481 aa18.21■□□□□ 0.51
PTPRU-206ENST00000465525 CHORDC1Q9UHD1 332 aaPredicted RBP18.21■□□□□ 0.51
PTPRU-206ENST00000465525 ATMINO43313 823 aaPredicted RBP18.2■□□□□ 0.5
PTPRU-206ENST00000465525 RTN2O75298 545 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 CXCL14O95715 111 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 FAM200BP0CF97 657 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 CYP2F1P24903 491 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 CDH5P33151 784 aaPredicted RBP18.2■□□□□ 0.5
PTPRU-206ENST00000465525 BCAT1P54687 386 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 MAP3K7CLP57077 242 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 KRT83P78385 493 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 CENPCQ03188 943 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 BST2Q10589 180 aaKnown RBP18.2■□□□□ 0.5
PTPRU-206ENST00000465525 PTPN14Q15678 1187 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 PLPP4Q5VZY2 271 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 PDE12Q6L8Q7 609 aaKnown RBP18.2■□□□□ 0.5
PTPRU-206ENST00000465525 ATAD1Q8NBU5 361 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 KCNK16Q96T55 309 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 SMOQ99835 787 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 TCF25Q9BQ70 676 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 LACRTQ9GZZ8 138 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 ISCUQ9H1K1 167 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 ENTPD7Q9NQZ7 604 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 ST7Q9NRC1 585 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 BACE2Q9Y5Z0 518 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 PLXNA3P51805 1871 aa18.2■□□□□ 0.5
PTPRU-206ENST00000465525 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.19■□□□□ 0.5
PTPRU-206ENST00000465525 LILRB3O75022 631 aa18.19■□□□□ 0.5
PTPRU-206ENST00000465525 VNN2O95498 520 aa18.19■□□□□ 0.5
PTPRU-206ENST00000465525 GZMAP12544 262 aa18.19■□□□□ 0.5
PTPRU-206ENST00000465525 ROR1Q01973 937 aa18.19■□□□□ 0.5
PTPRU-206ENST00000465525 MAPRE1Q15691 268 aaKnown RBP18.19■□□□□ 0.5
PTPRU-206ENST00000465525 PTPN20Q4JDL3 420 aa18.19■□□□□ 0.5
PTPRU-206ENST00000465525 CYP4A22Q5TCH4 519 aa18.19■□□□□ 0.5
PTPRU-206ENST00000465525 PMF1Q6P1K2 205 aa18.19■□□□□ 0.5
PTPRU-206ENST00000465525 CLEC20AQ6ZU45 233 aa18.19■□□□□ 0.5
PTPRU-206ENST00000465525 MICAL1Q8TDZ2 1067 aa18.19■□□□□ 0.5
PTPRU-206ENST00000465525 CPXM1Q96SM3 734 aa18.19■□□□□ 0.5
PTPRU-206ENST00000465525 DUSP16Q9BY84 665 aa18.19■□□□□ 0.5
PTPRU-206ENST00000465525 THAP2Q9H0W7 228 aa18.19■□□□□ 0.5
PTPRU-206ENST00000465525 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.19■□□□□ 0.5
PTPRU-206ENST00000465525 SLC27A5Q9Y2P5 690 aa18.19■□□□□ 0.5
PTPRU-206ENST00000465525 IRAK3Q9Y616 596 aa18.19■□□□□ 0.5
PTPRU-206ENST00000465525 COL4A4P53420 1690 aaPredicted RBP18.19■□□□□ 0.5
PTPRU-206ENST00000465525 PATJQ8NI35 1801 aa18.19■□□□□ 0.5
PTPRU-206ENST00000465525 WDR27A2RRH5 827 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 MTMR11A4FU01 709 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 EPOPA6NHQ4 379 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 SOX1O00570 391 aaPredicted RBP18.18■□□□□ 0.5
PTPRU-206ENST00000465525 SOAT2O75908 522 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 H2AFZP0C0S5 128 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 NPR3P17342 541 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 VAV2P52735 878 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 CREMQ03060 361 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 PDCLQ13371 301 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 CAMK1Q14012 370 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 SMC1AQ14683 1233 aaKnown RBP18.18■□□□□ 0.5
PTPRU-206ENST00000465525 SLC8B1Q6J4K2 584 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 C4orf50Q6ZRC1 276 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 H2AFVQ71UI9 128 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 MON1BQ7L1V2 547 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 SCN4BQ8IWT1 228 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 CCAR2Q8N163 923 aaKnown RBP18.18■□□□□ 0.5
PTPRU-206ENST00000465525 MRPL43Q8N983 215 aaKnown RBP18.18■□□□□ 0.5
PTPRU-206ENST00000465525 STKLD1Q8NE28 680 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 ZMIZ2Q8NF64 920 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 ARHGEF26Q96DR7 871 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms