RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 LRRC63Q05C16 580 aa13.82□□□□□ -0.2
XRN1-203ENST00000463916 KLHL10Q6JEL2 608 aa13.82□□□□□ -0.2
XRN1-203ENST00000463916 VSTM1Q6UX27 236 aa13.82□□□□□ -0.2
XRN1-203ENST00000463916 ACOT1Q86TX2 421 aa13.82□□□□□ -0.2
XRN1-203ENST00000463916 TRMT2BQ96GJ1 504 aaKnown RBP13.82□□□□□ -0.2
XRN1-203ENST00000463916 TSG101Q99816 390 aa13.82□□□□□ -0.2
XRN1-203ENST00000463916 BCO2Q9BYV7 579 aa13.82□□□□□ -0.2
XRN1-203ENST00000463916 KCNH6Q9H252 994 aa13.82□□□□□ -0.2
XRN1-203ENST00000463916 BRD9Q9H8M2 597 aa13.82□□□□□ -0.2
XRN1-203ENST00000463916 MTF2Q9Y483 593 aaPredicted RBP13.82□□□□□ -0.2
XRN1-203ENST00000463916 GREB1Q4ZG55 1949 aa13.82□□□□□ -0.2
XRN1-203ENST00000463916 OBSL1O75147 1896 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 ARNTLO00327 626 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 NDST1P52848 882 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 NOP14P78316 857 aaKnown RBP13.81□□□□□ -0.2
XRN1-203ENST00000463916 PFKPQ01813 784 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 MLF2Q15773 248 aaPredicted RBP13.81□□□□□ -0.2
XRN1-203ENST00000463916 CBWD6Q4V339 395 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 ARHGAP15Q53QZ3 475 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 CBWD3Q5JTY5 395 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 CBWD5Q5RIA9 395 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 KRT39Q6A163 491 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 PHLDB3Q6NSJ2 640 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 CMTM8Q8IZV2 173 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 DHTKD1Q96HY7 919 aaPredicted RBP13.81□□□□□ -0.2
XRN1-203ENST00000463916 SPATA17Q96L03 361 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 TWNKQ96RR1 684 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 SLC22A12Q96S37 553 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 DDX23Q9BUQ8 820 aaKnown RBP13.81□□□□□ -0.2
XRN1-203ENST00000463916 CCL26Q9Y258 94 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 PSMA7O14818 248 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 DCNP07585 359 aaKnown RBP13.81□□□□□ -0.2
XRN1-203ENST00000463916 GLULP15104 373 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 GTF2H1P32780 548 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 PLA2G5P39877 138 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 FCHO2Q0JRZ9 810 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 TTI2Q6NXR4 508 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 C12orf29Q8N999 325 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 RIN3Q8TB24 985 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 ZFYVE19Q96K21 471 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 GCNAQ96QF7 691 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 CYP2S1Q96SQ9 504 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 KCNK16Q96T55 309 aa13.81□□□□□ -0.2
XRN1-203ENST00000463916 GTPBP4Q9BZE4 634 aaKnown RBP13.81□□□□□ -0.2
XRN1-203ENST00000463916 CACNA1HO95180 2353 aa13.8□□□□□ -0.2
XRN1-203ENST00000463916 SLC16A3O15427 465 aaKnown RBP13.8□□□□□ -0.2
XRN1-203ENST00000463916 P4HA1P13674 534 aa13.8□□□□□ -0.2
XRN1-203ENST00000463916 NHLH1Q02575 133 aa13.8□□□□□ -0.2
XRN1-203ENST00000463916 DCAF17Q5H9S7 520 aaPredicted RBP13.8□□□□□ -0.2
XRN1-203ENST00000463916 DENND5BQ6ZUT9 1274 aa13.8□□□□□ -0.2
XRN1-203ENST00000463916 FUKQ8N0W3 1084 aa13.8□□□□□ -0.2
XRN1-203ENST00000463916 CRYBG2Q8N1P7 616 aa13.8□□□□□ -0.2
XRN1-203ENST00000463916 DEPDC1BQ8WUY9 529 aa13.8□□□□□ -0.2
XRN1-203ENST00000463916 NELFBQ8WX92 580 aa13.8□□□□□ -0.2
XRN1-203ENST00000463916 USP13Q92995 863 aaPredicted RBP13.8□□□□□ -0.2
XRN1-203ENST00000463916 C8orf48Q96LL4 319 aa13.8□□□□□ -0.2
XRN1-203ENST00000463916 DLGAP2Q9P1A6 1054 aa13.8□□□□□ -0.2
XRN1-203ENST00000463916 SIT1Q9Y3P8 196 aa13.8□□□□□ -0.2
XRN1-203ENST00000463916 NUP210Q8TEM1 1887 aaPredicted RBP13.8□□□□□ -0.2
XRN1-203ENST00000463916 H0Y858 1186 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 GALR2O43603 387 aaPredicted RBP13.79□□□□□ -0.2
XRN1-203ENST00000463916 CCDC130P13994 396 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 WEE1P30291 646 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 MXI1P50539 228 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 STX17P56962 302 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 PRKCQQ04759 706 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 STIM1Q13586 685 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 TCERG1LQ5VWI1 586 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 TPRG1Q6ZUI0 275 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 MON1AQ86VX9 555 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 PJA1Q8NG27 643 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 WHAMMQ8TF30 809 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 IRF7Q92985 503 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 SLC35C1Q96A29 364 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 E2F7Q96AV8 911 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 FAM122AQ96E09 287 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 TNIP3Q96KP6 325 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 PHOX2BQ99453 314 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 ELOVL4Q9GZR5 314 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 RAB20Q9NX57 234 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 KIAA1468Q9P260 1216 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 UXTQ9UBK9 157 aaPredicted RBP13.79□□□□□ -0.2
XRN1-203ENST00000463916 ARMCX3Q9UH62 379 aaPredicted RBP13.79□□□□□ -0.2
XRN1-203ENST00000463916 CTNND2Q9UQB3 1225 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 FRYLO94915 3013 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 COL4A2P08572 1712 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 TICRRQ7Z2Z1 1910 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 KANSL1LA0AUZ9 987 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 C2orf78A6NCI8 922 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 ZNF263O14978 683 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 TRIM66O15016 1216 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 BEST1O76090 585 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 F5P12259 2224 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 CD58P19256 250 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 INCA1Q0VD86 236 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 FAM35AQ86V20 835 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 FBXL13Q8NEE6 735 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 MRPS31Q92665 395 aaKnown RBP13.79□□□□□ -0.2
XRN1-203ENST00000463916 DNASE1L2Q92874 299 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 TATDN2Q93075 761 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms