RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 GDAP2Q9NXN4 497 aa13.19□□□□□ -0.3
RPA3-206ENST00000463632 SIX4Q9UIU6 781 aa13.19□□□□□ -0.3
RPA3-206ENST00000463632 A0A087X0B3 334 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 C2orf78A6NCI8 922 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 KIAA0391O15091 583 aaKnown RBP13.18□□□□□ -0.3
RPA3-206ENST00000463632 LMO2P25791 158 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 GJA4P35212 333 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 PDE6CP51160 858 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 CYP2J2P51589 502 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 DGKEP52429 567 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 SEC13P55735 322 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 AMPD3Q01432 767 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 ZNF268Q14587 947 aaPredicted RBP13.18□□□□□ -0.3
RPA3-206ENST00000463632 MAPRE1Q15691 268 aaKnown RBP13.18□□□□□ -0.3
RPA3-206ENST00000463632 ELF2Q15723 593 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 FOXD4L6Q3SYB3 417 aaPredicted RBP13.18□□□□□ -0.3
RPA3-206ENST00000463632 FBXO43Q4G163 708 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 FOXD4L3Q6VB84 417 aaPredicted RBP13.18□□□□□ -0.3
RPA3-206ENST00000463632 NELFCDQ8IXH7 590 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 RIN3Q8TB24 985 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 OSCP1Q8WVF1 389 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 MYLPFQ96A32 169 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 CCDC127Q96BQ5 260 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 TRMT2BQ96GJ1 504 aaKnown RBP13.18□□□□□ -0.3
RPA3-206ENST00000463632 FUBP3Q96I24 572 aaKnown RBP eCLIP13.18□□□□□ -0.3
RPA3-206ENST00000463632 SLC22A12Q96S37 553 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 SMOC1Q9H4F8 434 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 ZSCAN16Q9H4T2 348 aaPredicted RBP13.18□□□□□ -0.3
RPA3-206ENST00000463632 TRPM5Q9NZQ8 1165 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 TFIP11Q9UBB9 837 aaKnown RBP13.18□□□□□ -0.3
RPA3-206ENST00000463632 CDH9Q9ULB4 789 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 INVSQ9Y283 1065 aa13.18□□□□□ -0.3
RPA3-206ENST00000463632 SOBPA7XYQ1 873 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 CLIC2O15247 247 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 SPTLC2O15270 562 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 PHACTR2O75167 634 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 TADA3O75528 432 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 APBB3O95704 486 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 TNNC1P63316 161 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 TRPC3Q13507 836 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 DMC1Q14565 340 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 CFAP221Q4G0U5 840 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 MDH1BQ5I0G3 518 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 DPH6Q7L8W6 267 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 CAMKK1Q8N5S9 505 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 GLIS3Q8NEA6 775 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 SPATA18Q8TC71 538 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 DDX1Q92499 740 aaKnown RBP13.17□□□□□ -0.3
RPA3-206ENST00000463632 ACDQ96AP0 544 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 MYRFLQ96LU7 910 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 ZNF396Q96N95 335 aaPredicted RBP13.17□□□□□ -0.3
RPA3-206ENST00000463632 LINC00597Q9H2U6 94 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 KIAA1586Q9HCI6 787 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 SMPD4Q9NXE4 827 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 HSPBP1Q9NZL4 362 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 MTMR6Q9Y217 621 aa13.17□□□□□ -0.3
RPA3-206ENST00000463632 TICRRQ7Z2Z1 1910 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 CEP250Q9BV73 2442 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 GABRDO14764 452 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 SCAMP3O14828 347 aaKnown RBP13.16□□□□□ -0.3
RPA3-206ENST00000463632 TRIM66O15016 1216 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 STX6O43752 255 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 RHOBTB1O94844 696 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 NFATC1O95644 943 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 GNL1P36915 607 aaPredicted RBP13.16□□□□□ -0.3
RPA3-206ENST00000463632 MAGEA11P43364 429 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 CREB5Q02930 508 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 ZNF77Q15935 545 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 C2orf27AQ580R0 203 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 TDRD10Q5VZ19 366 aaKnown RBP13.16□□□□□ -0.3
RPA3-206ENST00000463632 VSTM1Q6UX27 236 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 DENND5BQ6ZUT9 1274 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 TRAPPC11Q7Z392 1133 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 WDR49Q8IV35 697 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 IQUBQ8NA54 791 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 TSTD1Q8NFU3 115 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 CCDC26Q8TAB7 109 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 LOXL4Q96JB6 756 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 PKMYT1Q99640 499 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 TNMDQ9H2S6 317 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 EHD2Q9NZN4 543 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 NXF1Q9UBU9 619 aaKnown RBP13.16□□□□□ -0.3
RPA3-206ENST00000463632 ZNF292O60281 2723 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 PATJQ8NI35 1801 aa13.16□□□□□ -0.3
RPA3-206ENST00000463632 PTPRJQ12913 1337 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 DMDP11532 3685 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 CCDC163A0A0D9SF12 145 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 FRMD3A2A2Y4 597 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 F8VP50 259 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 DCLK1O15075 740 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 EPN2O95208 641 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 HSP90AA1P07900 732 aaKnown RBP13.15□□□□□ -0.3
RPA3-206ENST00000463632 ADRB1P08588 477 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 ZNF806P0C7X5 589 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 WARSP23381 471 aaKnown RBP13.15□□□□□ -0.3
RPA3-206ENST00000463632 MPLP40238 635 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 USP4Q13107 963 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 BIRC3Q13489 604 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 SNRNP35Q16560 246 aaKnown RBP13.15□□□□□ -0.3
RPA3-206ENST00000463632 EML3Q32P44 896 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms