RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 HMGA1P17096 107 aaKnown RBP13.96□□□□□ -0.17
HDAC1-203ENST00000463172 PFKLP17858 780 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 BDNFP23560 247 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 GTF2H1P32780 548 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 GPR15P49685 360 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 AMPD2Q01433 879 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 COBLL1Q53SF7 1204 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 STXBP5Q5T5C0 1151 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 SCARA3Q6AZY7 606 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 CC2D1AQ6P1N0 951 aaPredicted RBP13.96□□□□□ -0.17
HDAC1-203ENST00000463172 DENND5BQ6ZUT9 1274 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 SV2AQ7L0J3 742 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 ALYREFQ86V81 257 aaKnown RBP13.96□□□□□ -0.17
HDAC1-203ENST00000463172 MON1AQ86VX9 555 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 ELOA2Q8IYF1 753 aaPredicted RBP13.96□□□□□ -0.17
HDAC1-203ENST00000463172 MAB21L3Q8N8X9 362 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 B3GALNT2Q8NCR0 500 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 PLEKHO2Q8TD55 490 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 FAM3CQ92520 227 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 EXOC4Q96A65 974 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 PCED1BQ96HM7 432 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 IER2Q9BTL4 223 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 MED10Q9BTT4 135 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 GZF1Q9H116 711 aaPredicted RBP13.96□□□□□ -0.17
HDAC1-203ENST00000463172 XYLT2Q9H1B5 865 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 CRTAC1Q9NQ79 661 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 PIAS3Q9Y6X2 628 aa13.96□□□□□ -0.17
HDAC1-203ENST00000463172 GREB1Q4ZG55 1949 aa13.96□□□□□ -0.18
HDAC1-203ENST00000463172 PSMA7O14818 248 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 AKAP3O75969 853 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 USP17L7P0C7H9 530 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 RPS9P46781 194 aaKnown RBP13.95□□□□□ -0.18
HDAC1-203ENST00000463172 MRE11P49959 708 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 DLG4P78352 724 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 ZNF268Q14587 947 aaPredicted RBP13.95□□□□□ -0.18
HDAC1-203ENST00000463172 PPP2R5DQ14738 602 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 SDHAF4Q5VUM1 108 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 ZC3H14Q6PJT7 736 aaKnown RBP13.95□□□□□ -0.18
HDAC1-203ENST00000463172 POTEHQ6S545 545 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 SCARA5Q6ZMJ2 495 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 UNC93AQ86WB7 457 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 C1orf210Q8IVY1 113 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 TTC39CQ8N584 583 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 ENGASEQ8NFI3 743 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 C8orf48Q96LL4 319 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 SLC46A2Q9BY10 475 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 SMYD3Q9H7B4 428 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 TRPC7Q9HCX4 862 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 TDP1Q9NUW8 608 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 SPATA6Q9NWH7 488 aaPredicted RBP13.95□□□□□ -0.18
HDAC1-203ENST00000463172 TRPM5Q9NZQ8 1165 aa13.95□□□□□ -0.18
HDAC1-203ENST00000463172 NRG2O14511 850 aaPredicted RBP13.94□□□□□ -0.18
HDAC1-203ENST00000463172 SLC16A3O15427 465 aaKnown RBP13.94□□□□□ -0.18
HDAC1-203ENST00000463172 LAMTOR5O43504 91 aa13.94□□□□□ -0.18
HDAC1-203ENST00000463172 HCRTO43612 131 aa13.94□□□□□ -0.18
HDAC1-203ENST00000463172 RTN3O95197 1032 aaPredicted RBP13.94□□□□□ -0.18
HDAC1-203ENST00000463172 VNN1O95497 513 aa13.94□□□□□ -0.18
HDAC1-203ENST00000463172 ASS1P00966 412 aaKnown RBP13.94□□□□□ -0.18
HDAC1-203ENST00000463172 HLA-DRAP01903 254 aa13.94□□□□□ -0.18
HDAC1-203ENST00000463172 CKMP06732 381 aa13.94□□□□□ -0.18
HDAC1-203ENST00000463172 NOP14P78316 857 aaKnown RBP13.94□□□□□ -0.18
HDAC1-203ENST00000463172 FKBP3Q00688 224 aaKnown RBP13.94□□□□□ -0.18
HDAC1-203ENST00000463172 LRRC63Q05C16 580 aa13.94□□□□□ -0.18
HDAC1-203ENST00000463172 LRRC32Q14392 662 aa13.94□□□□□ -0.18
HDAC1-203ENST00000463172 ZCWPW2Q504Y3 356 aa13.94□□□□□ -0.18
HDAC1-203ENST00000463172 KRT39Q6A163 491 aa13.94□□□□□ -0.18
HDAC1-203ENST00000463172 PDZD8Q8NEN9 1154 aa13.94□□□□□ -0.18
HDAC1-203ENST00000463172 FAXDC2Q96IV6 333 aa13.94□□□□□ -0.18
HDAC1-203ENST00000463172 SLITRK1Q96PX8 696 aa13.94□□□□□ -0.18
HDAC1-203ENST00000463172 CYP3A43Q9HB55 503 aa13.94□□□□□ -0.18
HDAC1-203ENST00000463172 TMEM8AQ9HCN3 771 aa13.94□□□□□ -0.18
HDAC1-203ENST00000463172 PCDHA5Q9Y5H7 936 aa13.94□□□□□ -0.18
HDAC1-203ENST00000463172 F8VP50 259 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 PRAMEF12O95522 483 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 CD72P21854 359 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 ANP32AP39687 249 aaKnown RBP13.93□□□□□ -0.18
HDAC1-203ENST00000463172 NBL1P41271 181 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 PRCPP42785 496 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 GCLMP48507 274 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 PDGFRLQ15198 375 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 ITPRIPL2Q3MIP1 535 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 WDR44Q5JSH3 913 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 TXNDC8Q6A555 127 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 TMEM150AQ86TG1 271 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 RALGPS2Q86X27 583 aaPredicted RBP13.93□□□□□ -0.18
HDAC1-203ENST00000463172 GPIHBP1Q8IV16 184 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 SMYD4Q8IYR2 804 aaPredicted RBP13.93□□□□□ -0.18
HDAC1-203ENST00000463172 STKLD1Q8NE28 680 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 SPATA20Q8TB22 786 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 CLDN23Q96B33 292 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 SMARCD1Q96GM5 515 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 SEMA4AQ9H3S1 761 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 DPEP3Q9H4B8 488 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 MMRN2Q9H8L6 949 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 DMAP1Q9NPF5 467 aaPredicted RBP13.93□□□□□ -0.18
HDAC1-203ENST00000463172 FAM86C1Q9NVL1 165 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 CHMP5Q9NZZ3 219 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 DLGAP2Q9P1A6 1054 aa13.93□□□□□ -0.18
HDAC1-203ENST00000463172 NDRG2Q9UN36 371 aaKnown RBP13.93□□□□□ -0.18
HDAC1-203ENST00000463172 ANAPC1Q9H1A4 1944 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms