RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 PPIL6Q8IXY8 311 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 GRAMD1CQ8IYS0 662 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 CAMKK1Q8N5S9 505 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 C2orf69Q8N8R5 385 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 FBXO18Q8NFZ0 1043 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 PPP1R35Q8TAP8 253 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 NSUN6Q8TEA1 469 aaKnown RBP5.18□□□□□ -1.58
CSMD3-205ENST00000462254 LPAR1Q92633 364 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 COA7Q96BR5 231 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 RRP36Q96EU6 259 aaKnown RBP5.18□□□□□ -1.58
CSMD3-205ENST00000462254 MVB12AQ96EY5 273 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 C8orf76Q96K31 380 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 LZTS2Q9BRK4 669 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 SLC6A17Q9H1V8 727 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 VPS11Q9H270 941 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 RPAP3Q9H6T3 665 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-205ENST00000462254 RIC8AQ9NPQ8 531 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 GPRC5BQ9NZH0 403 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 GULP1Q9UBP9 304 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 KCNJ14Q9UNX9 436 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 NOC2LQ9Y3T9 749 aaKnown RBP5.18□□□□□ -1.58
CSMD3-205ENST00000462254 KIF3AQ9Y496 699 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 LOXHD1Q8IVV2 1947 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 MYH11P35749 1972 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 WDR33Q9C0J8 1336 aaKnown RBP5.18□□□□□ -1.58
CSMD3-205ENST00000462254 ZNF236Q9UL36 1845 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 A0A1W2PQ27 194 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 A0A1W2PQ64 194 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 A0A1W2PQC6 194 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 A0A1W2PQD8 194 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 A0A1W2PRQ8 180 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 CCDC66A2RUB6 948 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 H3BQV1 296 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 CXCL11O14625 94 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 B3GALT2O43825 422 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 TOMM70O94826 608 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 UBXN7O94888 489 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 CAPN3P20807 821 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 AGXTP21549 392 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 PEX2P28328 305 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 PRIM2P49643 509 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 TERF1P54274 439 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 HUNKP57058 714 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 KIF23Q02241 960 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-205ENST00000462254 MESP2Q0VG99 397 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 ZNF648Q5T619 568 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-205ENST00000462254 C1QTNF12Q5T7M4 302 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 RNF220Q5VTB9 566 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 IZUMO3Q5VZ72 239 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 FAAH2Q6GMR7 532 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 RETSATQ6NUM9 610 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 FAM180BQ6P0A1 224 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 FAM173BQ6P4H8 233 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 GADL1Q6ZQY3 521 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 CATSPERGQ6ZRH7 1159 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 USP45Q70EL2 814 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 HEATR3Q7Z4Q2 680 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 ZNF605Q86T29 641 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 FAM160B2Q86V87 743 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 RASAL3Q86YV0 1011 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 ZNF713Q8N859 430 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-205ENST00000462254 ZNF610Q8N9Z0 462 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 CHURC1Q8WUH1 139 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 WASF1Q92558 559 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 DPF3Q92784 378 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 TNPO1Q92973 898 aaKnown RBP5.17□□□□□ -1.58
CSMD3-205ENST00000462254 ACAP3Q96P50 834 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 SLF1Q9BQI6 1058 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 B3GNT5Q9BYG0 378 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 KRTAP4-8Q9BYQ9 185 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 ZDHHC5Q9C0B5 715 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 RANBP17Q9H2T7 1088 aaKnown RBP5.17□□□□□ -1.58
CSMD3-205ENST00000462254 DMRT3Q9NQL9 472 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 SH3GLB2Q9NR46 395 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 BARHL2Q9NY43 387 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 FAM53CQ9NYF3 392 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 TMOD4Q9NZQ9 345 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 SEC63Q9UGP8 760 aaKnown RBP5.17□□□□□ -1.58
CSMD3-205ENST00000462254 FEM1BQ9UK73 627 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 RWDD3Q9Y3V2 267 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 SPO11Q9Y5K1 396 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 ARID2Q68CP9 1835 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 ZNF536O15090 1300 aa5.17□□□□□ -1.58
CSMD3-205ENST00000462254 CASP8AP2Q9UKL3 1982 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 FRMPD3Q5JV73 1810 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 A0A087WV62 115 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 MYOCOSA0A1B0GUC4 107 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 ESYT2A0FGR8 921 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 BTBD18B2RXH4 712 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 MEFVO15553 781 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-205ENST00000462254 MAFKO60675 156 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 FLOT1O75955 427 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 RPN1P04843 607 aaKnown RBP5.16□□□□□ -1.58
CSMD3-205ENST00000462254 LCP1P13796 627 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 ABCB4P21439 1286 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 C5AR1P21730 350 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 TNFSF4P23510 183 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 U2AF2P26368 475 aaKnown RBP eCLIP5.16□□□□□ -1.58
CSMD3-205ENST00000462254 HOXA7P31268 230 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-205ENST00000462254 CASP5P51878 434 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms