RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 ARHGEF35A5YM69 484 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 MAGEB2O15479 319 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 ARHGAP6O43182 974 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 SLC26A4O43511 780 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 CUTAO60888 179 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 ZNF623O75123 536 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 STBD1O95210 358 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 LYPLA2O95372 231 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 IPO7O95373 1038 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 EFEMP2O95967 443 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 POMCP01189 267 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 HNRNPA1P09651 372 aaKnown RBP eCLIP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 DARSP14868 501 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 RPL17P18621 184 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 ATF4P18848 351 aaPredicted RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 NOS2P35228 1153 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 PXNP49023 591 aaPredicted RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 CLCN3P51790 818 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 AFF1P51825 1210 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 NPEPPSP55786 919 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 GSCP56915 257 aaPredicted RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 CREB5Q02930 508 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 GRM2Q14416 872 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 KARSQ15046 597 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 PPM1LQ5SGD2 360 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 TEX35Q5T0J7 233 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 CCDC183Q5T5S1 534 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 PPP1R26Q5T8A7 1209 aaPredicted RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 TWF2Q6IBS0 349 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 ANO5Q75V66 913 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 JAZF1Q86VZ6 243 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 EXOC8Q8IYI6 725 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 RNF168Q8IYW5 571 aaPredicted RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 CCDC116Q8IYX3 515 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 URGCPQ8TCY9 931 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 PIGOQ8TEQ8 1089 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 LEO1Q8WVC0 666 aaPredicted RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 SLC7A3Q8WY07 619 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 ELSPBP1Q96BH3 223 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 PGBD4Q96DM1 585 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 IFT43Q96FT9 208 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 EPSTI1Q96J88 318 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 B3GALT6Q96L58 329 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 SH2D3AQ9BRG2 576 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 MMTAG2Q9BU76 263 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 TRMT61BQ9BVS5 477 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 CCSER1Q9C0I3 900 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 SLC32A1Q9H598 525 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 CXorf56Q9H5V9 222 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 CCDC86Q9H6F5 360 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 C12orf49Q9H741 205 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 SUDS3Q9H7L9 328 aaPredicted RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 ZNF334Q9HCZ1 680 aaPredicted RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 CHST7Q9NS84 486 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 ANKEF1Q9NU02 776 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 DDX19AQ9NUU7 478 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 HCFC1R1Q9NWW0 138 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 MARCH5Q9NX47 278 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 KLK14Q9P0G3 267 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 FNIP2Q9P278 1114 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 KANSL3Q9P2N6 904 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 DNMT3BQ9UBC3 853 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 KCNH3Q9ULD8 1083 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 PCDHA7Q9UN72 937 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 DNM3Q9UQ16 869 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 PRG3Q9Y2Y8 225 aaPredicted RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 MRPS23Q9Y3D9 190 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 PIAS3Q9Y6X2 628 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 PLXNB3Q9ULL4 1909 aa6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 LNP1A1A4G5 178 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 BCLAF3A2AJT9 711 aaKnown RBP6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 GOLGA6L4A6NEF3 574 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 E9PMD0 336 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 H0Y626 953 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 J3QKU1 62 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 KHNYNO15037 678 aaKnown RBP6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 CPNE3O75131 537 aaKnown RBP6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 XYLBO75191 536 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 STK10O94804 968 aaKnown RBP6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 TRIM16O95361 564 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 SETSIPP0DME0 302 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 PCSK2P16519 638 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 TMOD1P28289 359 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 GDI1P31150 447 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 STAT6P42226 847 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 OR1G1P47890 313 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 RARRES1P49788 294 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 ST13P50502 369 aaKnown RBP6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 DNM2P50570 870 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 GPC3P51654 580 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 IRX1P78414 480 aaPredicted RBP6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 SIM1P81133 766 aaPredicted RBP6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 GPS2Q13227 327 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 LRRC32Q14392 662 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 EMC2Q15006 297 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 TARBP2Q15633 366 aaKnown RBP6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 PLK5Q496M5 336 aa6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 PABPC1LQ4VXU2 614 aaKnown RBP6.47□□□□□ -1.37
SMARCC1-204ENST00000462198 RRAGBQ5VZM2 374 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms