RNA–Protein interactions for RNA: ENST00000462130.1

HDLBP-230, Transcript of high density lipoprotein binding protein, human

TSL 4

Gene HDLBP, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-230	ENST00000462130	CMTM8	Q8IZV2	173 aa		10.84	□□□□□ -0.67
HDLBP-230	ENST00000462130	MAB21L3	Q8N8X9	362 aa		10.84	□□□□□ -0.67
HDLBP-230	ENST00000462130	MRPS31	Q92665	395 aa	Known RBP	10.84	□□□□□ -0.67
HDLBP-230	ENST00000462130	ACCS	Q96QU6	501 aa		10.84	□□□□□ -0.67
HDLBP-230	ENST00000462130	ST6GALNAC4	Q9H4F1	302 aa		10.84	□□□□□ -0.67
HDLBP-230	ENST00000462130	LMBRD1	Q9NUN5	540 aa		10.84	□□□□□ -0.67
HDLBP-230	ENST00000462130	SEL1L	Q9UBV2	794 aa		10.84	□□□□□ -0.67
HDLBP-230	ENST00000462130	MAGED2	Q9UNF1	606 aa	Predicted RBP	10.84	□□□□□ -0.67
HDLBP-230	ENST00000462130	STYXL1	Q9Y6J8	313 aa		10.84	□□□□□ -0.67
HDLBP-230	ENST00000462130	MYO16	Q9Y6X6	1858 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	ATG13	O75143	517 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	CSH1	P0DML2	217 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	CSH2	P0DML3	217 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	DDX6	P26196	483 aa	Known RBP eCLIP	10.83	□□□□□ -0.68	8e-8	■■■□□ 16
HDLBP-230	ENST00000462130	HOXD13	P35453	343 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	PNPLA4	P41247	253 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	NLRP12	P59046	1061 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	TFAM	Q00059	246 aa	Known RBP	10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	MYL7	Q01449	175 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	GRSF1	Q12849	480 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	DPYD	Q12882	1025 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	NFE2	Q16621	373 aa	Predicted RBP	10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	PPM1J	Q5JR12	505 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	FAM26F	Q5R3K3	315 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	DMRTA1	Q5VZB9	504 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	ISM2	Q6H9L7	571 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	WDR5B	Q86VZ2	330 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	PLPP6	Q8IY26	295 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	EFCAB13	Q8IY85	973 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	FAM160A2	Q8N612	972 aa	Predicted RBP	10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	ZNF507	Q8TCN5	953 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	NOC3L	Q8WTT2	800 aa	Known RBP	10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	CACTIN	Q8WUQ7	758 aa	Known RBP	10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	HVCN1	Q96D96	273 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	TIGD1	Q96MW7	591 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	PI4K2A	Q9BTU6	479 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	EBF3	Q9H4W6	596 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	KIF9	Q9HAQ2	790 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	OLFML3	Q9NRN5	406 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	C2orf42	Q9NWW7	574 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	SLC8A2	Q9UPR5	921 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	EXOC7	Q9UPT5	735 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	ACACB	O00763	2458 aa		10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	CNOT1	A5YKK6	2376 aa	Known RBP	10.83	□□□□□ -0.68
HDLBP-230	ENST00000462130	HELZ	P42694	1942 aa	Known RBP	10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	TK2	O00142	265 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	AXIN1	O15169	862 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	EXTL3	O43909	919 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	HUS1	O60921	280 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	LDHA	P00338	332 aa	Known RBP	10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	F11	P03951	625 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	ADRB1	P08588	477 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	CCDC192	P0DO97	292 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	POLR2B	P30876	1174 aa	Known RBP	10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	HOXA6	P31267	233 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	PXN	P49023	591 aa	Predicted RBP	10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	RPL10A	P62906	217 aa	Known RBP	10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	EHHADH	Q08426	723 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	PSMD2	Q13200	908 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	CAMK4	Q16566	473 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	AASDH	Q4L235	1098 aa	Predicted RBP	10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	L1TD1	Q5T7N2	865 aa	Known RBP	10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	TXNDC8	Q6A555	127 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	TRIM68	Q6AZZ1	485 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	IL31	Q6EBC2	164 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	CRELD2	Q6UXH1	353 aa	Predicted RBP	10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	EPM2AIP1	Q7L775	607 aa	Predicted RBP	10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	NELFCD	Q8IXH7	590 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	C12orf50	Q8NA57	414 aa	Predicted RBP	10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	TTC16	Q8NEE8	873 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	SCFD1	Q8WVM8	642 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	USP13	Q92995	863 aa	Predicted RBP	10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	EXOC4	Q96A65	974 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	GBP4	Q96PP9	640 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	FAM83C	Q9BQN1	747 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	FAM213A	Q9BRX8	229 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	ARRDC1-AS1	Q9H2J1	176 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	PCIF1	Q9H4Z3	704 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	HPS4	Q9NQG7	708 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	TDP1	Q9NUW8	608 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	DDX43	Q9NXZ2	648 aa	Known RBP	10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	UXT	Q9UBK9	157 aa	Predicted RBP	10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	AGAP1	Q9UPQ3	857 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	MAPK8IP1	Q9UQF2	711 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	CCL26	Q9Y258	94 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	PCDHA5	Q9Y5H7	936 aa		10.82	□□□□□ -0.68
HDLBP-230	ENST00000462130	EPG5	Q9HCE0	2579 aa		10.81	□□□□□ -0.68
HDLBP-230	ENST00000462130	NUP205	Q92621	2012 aa		10.81	□□□□□ -0.68
HDLBP-230	ENST00000462130	SOBP	A7XYQ1	873 aa		10.81	□□□□□ -0.68
HDLBP-230	ENST00000462130	GDF9	O60383	454 aa		10.81	□□□□□ -0.68
HDLBP-230	ENST00000462130	RNF40	O75150	1001 aa		10.81	□□□□□ -0.68
HDLBP-230	ENST00000462130	RPP40	O75818	363 aa	Known RBP	10.81	□□□□□ -0.68
HDLBP-230	ENST00000462130	ITGB3	P05106	788 aa		10.81	□□□□□ -0.68
HDLBP-230	ENST00000462130	MYL1	P05976	194 aa		10.81	□□□□□ -0.68
HDLBP-230	ENST00000462130	KRT19	P08727	400 aa		10.81	□□□□□ -0.68
HDLBP-230	ENST00000462130	HMGA1	P17096	107 aa	Known RBP	10.81	□□□□□ -0.68
HDLBP-230	ENST00000462130	ADSS	P30520	456 aa		10.81	□□□□□ -0.68
HDLBP-230	ENST00000462130	HOXC13	P31276	330 aa		10.81	□□□□□ -0.68
HDLBP-230	ENST00000462130	GPR15	P49685	360 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms