RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 ABCB6Q9NP58 842 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 TRPV5Q9NQA5 729 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 HPS4Q9NQG7 708 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 GKN1Q9NS71 199 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 DMAC2Q9NW81 257 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 C2orf42Q9NWW7 574 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 FAM237AA0A1B0GTK4 181 aa16.56■□□□□ 0.24
NUP50-213ENST00000461437 C2orf78A6NCI8 922 aa16.56■□□□□ 0.24
NUP50-213ENST00000461437 OTOL1A6NHN0 477 aaPredicted RBP16.56■□□□□ 0.24
NUP50-213ENST00000461437 NCAM2O15394 837 aa16.56■□□□□ 0.24
NUP50-213ENST00000461437 C4BPAP04003 597 aaKnown RBP16.56■□□□□ 0.24
NUP50-213ENST00000461437 CHRNB1P11230 501 aa16.56■□□□□ 0.24
NUP50-213ENST00000461437 ARSAP15289 507 aa16.56■□□□□ 0.24
NUP50-213ENST00000461437 CTHP32929 405 aa16.56■□□□□ 0.24
NUP50-213ENST00000461437 DPYDQ12882 1025 aa16.56■□□□□ 0.24
NUP50-213ENST00000461437 IFRD2Q12894 506 aaPredicted RBP16.56■□□□□ 0.24
NUP50-213ENST00000461437 NAIF1Q69YI7 327 aaPredicted RBP16.56■□□□□ 0.24
NUP50-213ENST00000461437 SPOPLQ6IQ16 392 aa16.56■□□□□ 0.24
NUP50-213ENST00000461437 C4orf50Q6ZRC1 276 aa16.56■□□□□ 0.24
NUP50-213ENST00000461437 SMYD4Q8IYR2 804 aaPredicted RBP16.56■□□□□ 0.24
NUP50-213ENST00000461437 DCLK2Q8N568 766 aa16.56■□□□□ 0.24
NUP50-213ENST00000461437 SPATA18Q8TC71 538 aa16.56■□□□□ 0.24
NUP50-213ENST00000461437 FUBP3Q96I24 572 aaKnown RBP eCLIP16.56■□□□□ 0.24
NUP50-213ENST00000461437 ZNF518BQ9C0D4 1074 aa16.56■□□□□ 0.24
NUP50-213ENST00000461437 CHRDQ9H2X0 955 aa16.56■□□□□ 0.24
NUP50-213ENST00000461437 EBF3Q9H4W6 596 aa16.56■□□□□ 0.24
NUP50-213ENST00000461437 CGNQ9P2M7 1197 aaKnown RBP16.56■□□□□ 0.24
NUP50-213ENST00000461437 GVINP1Q7Z2Y8 2422 aa16.56■□□□□ 0.24
NUP50-213ENST00000461437 GPR179Q6PRD1 2367 aa16.56■□□□□ 0.24
NUP50-213ENST00000461437 OTOGLQ3ZCN5 2332 aa16.56■□□□□ 0.24
NUP50-213ENST00000461437 KIAA1549LQ6ZVL6 1849 aa16.55■□□□□ 0.24
NUP50-213ENST00000461437 A8MXQ7 604 aa16.55■□□□□ 0.24
NUP50-213ENST00000461437 F8VP50 259 aa16.55■□□□□ 0.24
NUP50-213ENST00000461437 ZNF202O95125 648 aa16.55■□□□□ 0.24
NUP50-213ENST00000461437 LMNAP02545 664 aaKnown RBP16.55■□□□□ 0.24
NUP50-213ENST00000461437 PTPN1P18031 435 aaKnown RBP16.55■□□□□ 0.24
NUP50-213ENST00000461437 RPS9P46781 194 aaKnown RBP16.55■□□□□ 0.24
NUP50-213ENST00000461437 SATB1Q01826 763 aa16.55■□□□□ 0.24
NUP50-213ENST00000461437 PSMD2Q13200 908 aa16.55■□□□□ 0.24
NUP50-213ENST00000461437 NCOA4Q13772 614 aa16.55■□□□□ 0.24
NUP50-213ENST00000461437 ZNF699Q32M78 642 aa16.55■□□□□ 0.24
NUP50-213ENST00000461437 C1orf220Q5T0J3 134 aa16.55■□□□□ 0.24
NUP50-213ENST00000461437 MON1AQ86VX9 555 aa16.55■□□□□ 0.24
NUP50-213ENST00000461437 ARL14EPQ8N8R7 260 aaPredicted RBP16.55■□□□□ 0.24
NUP50-213ENST00000461437 MYCBPAPQ8TBZ2 947 aa16.55■□□□□ 0.24
NUP50-213ENST00000461437 ERCC4Q92889 916 aaPredicted RBP16.55■□□□□ 0.24
NUP50-213ENST00000461437 CHFRQ96EP1 664 aa16.55■□□□□ 0.24
NUP50-213ENST00000461437 B3GNT5Q9BYG0 378 aa16.55■□□□□ 0.24
NUP50-213ENST00000461437 MMRN2Q9H8L6 949 aa16.55■□□□□ 0.24
NUP50-213ENST00000461437 TDP1Q9NUW8 608 aa16.55■□□□□ 0.24
NUP50-213ENST00000461437 OBP2AQ9NY56 170 aa16.55■□□□□ 0.24
NUP50-213ENST00000461437 USP25Q9UHP3 1055 aa16.55■□□□□ 0.24
NUP50-213ENST00000461437 PDXKO00764 312 aa16.54■□□□□ 0.24
NUP50-213ENST00000461437 SCAMP3O14828 347 aaKnown RBP16.54■□□□□ 0.24
NUP50-213ENST00000461437 TACC1O75410 805 aa16.54■□□□□ 0.24
NUP50-213ENST00000461437 TRIM49P0CI25 452 aa16.54■□□□□ 0.24
NUP50-213ENST00000461437 TRIM49CP0CI26 452 aa16.54■□□□□ 0.24
NUP50-213ENST00000461437 WEE1P30291 646 aa16.54■□□□□ 0.24
NUP50-213ENST00000461437 MAGEA9P43362 315 aa16.54■□□□□ 0.24
NUP50-213ENST00000461437 MAGEA11P43364 429 aa16.54■□□□□ 0.24
NUP50-213ENST00000461437 DMWDQ09019 674 aa16.54■□□□□ 0.24
NUP50-213ENST00000461437 GOLGA5Q8TBA6 731 aa16.54■□□□□ 0.24
NUP50-213ENST00000461437 SYAP1Q96A49 352 aaPredicted RBP16.54■□□□□ 0.24
NUP50-213ENST00000461437 EEF2KMTQ96G04 330 aa16.54■□□□□ 0.24
NUP50-213ENST00000461437 TRMT2BQ96GJ1 504 aaKnown RBP16.54■□□□□ 0.24
NUP50-213ENST00000461437 MYRFLQ96LU7 910 aa16.54■□□□□ 0.24
NUP50-213ENST00000461437 SCAND2PQ9GZW5 306 aaPredicted RBP16.54■□□□□ 0.24
NUP50-213ENST00000461437 PRMT8Q9NR22 394 aaPredicted RBP16.54■□□□□ 0.24
NUP50-213ENST00000461437 HMGXB4Q9UGU5 601 aa16.54■□□□□ 0.24
NUP50-213ENST00000461437 FBXO4Q9UKT5 387 aa16.54■□□□□ 0.24
NUP50-213ENST00000461437 WNT6Q9Y6F9 365 aa16.54■□□□□ 0.24
NUP50-213ENST00000461437 SPTBN4Q9H254 2564 aa16.54■□□□□ 0.24
NUP50-213ENST00000461437 EML5Q05BV3 1969 aa16.53■□□□□ 0.24
NUP50-213ENST00000461437 A0A1W2PQ27 194 aa16.53■□□□□ 0.24
NUP50-213ENST00000461437 A0A1W2PQ64 194 aa16.53■□□□□ 0.24
NUP50-213ENST00000461437 A0A1W2PQD8 194 aa16.53■□□□□ 0.24
NUP50-213ENST00000461437 RHOBTB3O94955 611 aa16.53■□□□□ 0.24
NUP50-213ENST00000461437 CKMP06732 381 aa16.53■□□□□ 0.24
NUP50-213ENST00000461437 ANXA13P27216 316 aa16.53■□□□□ 0.24
NUP50-213ENST00000461437 PNOCQ13519 176 aa16.53■□□□□ 0.24
NUP50-213ENST00000461437 ZNF667Q5HYK9 610 aa16.53■□□□□ 0.24
NUP50-213ENST00000461437 PKN3Q6P5Z2 889 aa16.53■□□□□ 0.24
NUP50-213ENST00000461437 SLC9A9Q8IVB4 645 aa16.53■□□□□ 0.24
NUP50-213ENST00000461437 HINFPQ9BQA5 517 aa16.53■□□□□ 0.24
NUP50-213ENST00000461437 FAM83CQ9BQN1 747 aa16.53■□□□□ 0.24
NUP50-213ENST00000461437 C8orf33Q9H7E9 229 aaPredicted RBP16.53■□□□□ 0.24
NUP50-213ENST00000461437 POLR3BQ9NW08 1133 aaPredicted RBP16.53■□□□□ 0.24
NUP50-213ENST00000461437 THG1LQ9NWX6 298 aaKnown RBP16.53■□□□□ 0.24
NUP50-213ENST00000461437 GCNT4Q9P109 453 aa16.53■□□□□ 0.24
NUP50-213ENST00000461437 UXTQ9UBK9 157 aaPredicted RBP16.53■□□□□ 0.24
NUP50-213ENST00000461437 RALGAPA1Q6GYQ0 2036 aa16.53■□□□□ 0.24
NUP50-213ENST00000461437 TRAV19A0A0A6YYK7 116 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 CALUO43852 315 aaPredicted RBP16.52■□□□□ 0.24
NUP50-213ENST00000461437 AKAP3O75969 853 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 STAU1O95793 577 aaKnown RBP16.52■□□□□ 0.24
NUP50-213ENST00000461437 ABL1P00519 1130 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 TDGF1P13385 188 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 NR2F2P24468 414 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 DDX6P26196 483 aaKnown RBP eCLIP16.52■□□□□ 0.24
NUP50-213ENST00000461437 ATICP31939 592 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms