RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 GPX6P59796 221 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 ELF3P78545 371 aaPredicted RBP19.04■□□□□ 0.64
HPS3-202ENST00000460120 PTPN11Q06124 597 aaPredicted RBP19.04■□□□□ 0.64
HPS3-202ENST00000460120 TMEM62Q0P6H9 643 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 LRRC38Q5VT99 294 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 MAP1SQ66K74 1059 aaPredicted RBP19.04■□□□□ 0.64
HPS3-202ENST00000460120 FAM228AQ86W67 206 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 FITM2Q8N6M3 262 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 PYROXD1Q8WU10 500 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 ZNF518BQ9C0D4 1074 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 CXCL16Q9H2A7 254 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 FZD8Q9H461 694 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 STRIP2Q9ULQ0 834 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 LTBP3Q9NS15 1303 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 MED7O43513 233 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 PROZP22891 400 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 EIF3EP60228 445 aaKnown RBP19.03■□□□□ 0.64
HPS3-202ENST00000460120 IL9RQ01113 521 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 MORF4L2Q15014 288 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 SURF1Q15526 300 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 OR6B2Q6IFH4 312 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 PPP1R2P3Q6NXS1 205 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 CCHCR1Q8TD31 782 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 CPT1BQ92523 772 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 SMC6Q96SB8 1091 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 PPP2R3BQ9Y5P8 575 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 IGKV6-21A0A0C4DH24 114 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 B4GALT4O60513 344 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 OAS1P00973 400 aaKnown RBP19.03■□□□□ 0.64
HPS3-202ENST00000460120 ITGAVP06756 1048 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 MGAT5Q09328 741 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 XRCC4Q13426 336 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 FBXO36Q8NEA4 188 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 SLC35B2Q8TB61 432 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 MAGEB18Q96M61 343 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 MAK16Q9BXY0 300 aaKnown RBP19.03■□□□□ 0.64
HPS3-202ENST00000460120 IFT122Q9HBG6 1241 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 PCDH9Q9HC56 1237 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.03■□□□□ 0.64
HPS3-202ENST00000460120 CHMP2BQ9UQN3 213 aa19.03■□□□□ 0.64
HPS3-202ENST00000460120 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.03■□□□□ 0.64
HPS3-202ENST00000460120 TCEA3O75764 348 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 DNAJC8O75937 253 aaPredicted RBP19.02■□□□□ 0.64
HPS3-202ENST00000460120 TMEM63AO94886 807 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 RDXP35241 583 aaKnown RBP19.02■□□□□ 0.64
HPS3-202ENST00000460120 GRM1Q13255 1194 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 SLC1A5Q15758 541 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 FAXCQ5TGI0 409 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 C3orf62Q6ZUJ4 267 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 NLRP7Q8WX94 980 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 TMEM176AQ96HP8 235 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 HPDLQ96IR7 371 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 PEBP4Q96S96 227 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 LPIN3Q9BQK8 851 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 SMARCAD1Q9H4L7 1026 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 EURLQ9NYK6 297 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 XPO7Q9UIA9 1087 aaKnown RBP19.02■□□□□ 0.64
HPS3-202ENST00000460120 USP18Q9UMW8 372 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 A0A0G2JLL6 359 aaPredicted RBP19.02■□□□□ 0.64
HPS3-202ENST00000460120 A8MUI8 341 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 AVILO75366 819 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 KRT7P08729 469 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 KRT4P19013 534 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 CDH6P55285 790 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 TAP1Q03518 808 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 PRRT2Q7Z6L0 340 aaPredicted RBP19.02■□□□□ 0.64
HPS3-202ENST00000460120 SPATA18Q8TC71 538 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 NKD2Q969F2 451 aaPredicted RBP19.02■□□□□ 0.64
HPS3-202ENST00000460120 FAM49BQ9NUQ9 324 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 DRG1Q9Y295 367 aaKnown RBP19.02■□□□□ 0.64
HPS3-202ENST00000460120 ARL2BPQ9Y2Y0 163 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 CLUHO75153 1309 aa19.02■□□□□ 0.64
HPS3-202ENST00000460120 IGF2BP3O00425 579 aaKnown RBP eCLIP19.02■□□□□ 0.63
HPS3-202ENST00000460120 LGR5O75473 907 aa19.02■□□□□ 0.63
HPS3-202ENST00000460120 RNF8O76064 485 aa19.02■□□□□ 0.63
HPS3-202ENST00000460120 RBP3P10745 1247 aa19.02■□□□□ 0.63
HPS3-202ENST00000460120 CDH5P33151 784 aaPredicted RBP19.02■□□□□ 0.63
HPS3-202ENST00000460120 IREB2P48200 963 aaKnown RBP19.02■□□□□ 0.63
HPS3-202ENST00000460120 NDST1P52848 882 aa19.02■□□□□ 0.63
HPS3-202ENST00000460120 COPS2P61201 443 aa19.02■□□□□ 0.63
HPS3-202ENST00000460120 NCALDP61601 193 aa19.02■□□□□ 0.63
HPS3-202ENST00000460120 PPP1R21Q6ZMI0 780 aa19.02■□□□□ 0.63
HPS3-202ENST00000460120 PLPPR4Q7Z2D5 763 aa19.02■□□□□ 0.63
HPS3-202ENST00000460120 FBF1Q8TES7 1133 aa19.02■□□□□ 0.63
HPS3-202ENST00000460120 P3H4Q92791 437 aa19.02■□□□□ 0.63
HPS3-202ENST00000460120 WDR83Q9BRX9 315 aaKnown RBP19.02■□□□□ 0.63
HPS3-202ENST00000460120 E5RJQ4 531 aa19.01■□□□□ 0.63
HPS3-202ENST00000460120 AMHR2Q16671 573 aa19.01■□□□□ 0.63
HPS3-202ENST00000460120 DARS2Q6PI48 645 aaKnown RBP19.01■□□□□ 0.63
HPS3-202ENST00000460120 PALM2Q8IXS6 379 aa19.01■□□□□ 0.63
HPS3-202ENST00000460120 MPHOSPH6Q99547 160 aaKnown RBP19.01■□□□□ 0.63
HPS3-202ENST00000460120 KLHL14Q9P2G3 628 aa19.01■□□□□ 0.63
HPS3-202ENST00000460120 HEY1Q9Y5J3 304 aa19.01■□□□□ 0.63
HPS3-202ENST00000460120 ALOX15BO15296 676 aa19.01■□□□□ 0.63
HPS3-202ENST00000460120 HBP1O60381 514 aa19.01■□□□□ 0.63
HPS3-202ENST00000460120 C22orf31O95567 290 aa19.01■□□□□ 0.63
HPS3-202ENST00000460120 ARF4P18085 180 aaPredicted RBP19.01■□□□□ 0.63
HPS3-202ENST00000460120 DRICH1Q6PGQ1 229 aaPredicted RBP19.01■□□□□ 0.63
HPS3-202ENST00000460120 ECHDC2Q86YB7 292 aa19.01■□□□□ 0.63
HPS3-202ENST00000460120 NIPA2Q8N8Q9 360 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms