RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 CCT8L1PA6NM43 557 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 PLA2G6O60733 806 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 CCNE2O96020 404 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 GBP1P32455 592 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 CYB5D1Q6P9G0 228 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 AFAP1L2Q8N4X5 818 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 PSPC1Q8WXF1 523 aaKnown RBP12.4□□□□□ -0.42
SYNE2-207ENST00000458046 POMGNT1Q8WZA1 660 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 CNKSR1Q969H4 720 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 HEMGNQ9BXL5 484 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 KIAA1586Q9HCI6 787 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 TMEM8AQ9HCN3 771 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 UVRAGQ9P2Y5 699 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 MCM8Q9UJA3 840 aa12.4□□□□□ -0.42
SYNE2-207ENST00000458046 F5H423 210 aaPredicted RBP12.39□□□□□ -0.43
SYNE2-207ENST00000458046 TP73O15350 636 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 POLR2BP30876 1174 aaKnown RBP12.39□□□□□ -0.43
SYNE2-207ENST00000458046 GPC3P51654 580 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 RPS6P62753 249 aaKnown RBP12.39□□□□□ -0.43
SYNE2-207ENST00000458046 LACTB2Q53H82 288 aaPredicted RBP12.39□□□□□ -0.43
SYNE2-207ENST00000458046 PCNX4Q63HM2 1172 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 CYFIP1Q7L576 1253 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 SLAIN1Q8ND83 568 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 BSNDQ8WZ55 320 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 KIFAP3Q92845 792 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 LRRC19Q9H756 370 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 AAASQ9NRG9 546 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 TBC1D22BQ9NU19 505 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 ABHD14A-ACY1A0A1B0GW23 586 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 PSMC5P62195 406 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 CNGA2Q16280 664 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 KYNUQ16719 465 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 SLC39A4Q6P5W5 647 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 ANO5Q75V66 913 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 PIGWQ7Z7B1 504 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 C4orf19Q8IY42 314 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 ANKS4BQ8N8V4 417 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 TMEM174Q8WUU8 243 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 DYDC1Q8WWB3 177 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 ZKSCAN4Q969J2 545 aaPredicted RBP12.39□□□□□ -0.43
SYNE2-207ENST00000458046 ST6GALNAC4Q9H4F1 302 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 CTNNAL1Q9UBT7 734 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 EXOC7Q9UPT5 735 aa12.39□□□□□ -0.43
SYNE2-207ENST00000458046 RBBP6Q7Z6E9 1792 aaKnown RBP12.39□□□□□ -0.43
SYNE2-207ENST00000458046 C9IYK1 514 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 FSCN2O14926 492 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 MAPK13O15264 365 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 SP4Q02446 784 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 LMNB2Q03252 620 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 DMP1Q13316 513 aaPredicted RBP12.38□□□□□ -0.43
SYNE2-207ENST00000458046 CLEC16AQ2KHT3 1053 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 TRIM74Q86UV6 250 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 TRIM73Q86UV7 250 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 RMDN3Q96TC7 470 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 FAM213AQ9BRX8 229 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 KCNK9Q9NPC2 374 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 SAMD15Q9P1V8 674 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 PDP2Q9P2J9 529 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 COQ4Q9Y3A0 265 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 FAM221AA4D161 298 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 O00370 1275 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 CHUKO15111 745 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 ASAP2O43150 1006 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 LYPLA2O95372 231 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 GRK2P25098 689 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 MPP1Q00013 466 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 PLCB3Q01970 1234 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 ADCY1Q08828 1119 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 PRKG2Q13237 762 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 PGM5Q15124 567 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 C2orf27AQ580R0 203 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 NEK10Q6ZWH5 1172 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 TAOK1Q7L7X3 1001 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 NIPA1Q7RTP0 329 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 MAP4K3Q8IVH8 894 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 SLC44A2Q8IWA5 706 aaPredicted RBP12.38□□□□□ -0.43
SYNE2-207ENST00000458046 NSUN6Q8TEA1 469 aaKnown RBP12.38□□□□□ -0.43
SYNE2-207ENST00000458046 ARHGEF2Q92974 986 aaKnown RBP12.38□□□□□ -0.43
SYNE2-207ENST00000458046 RUNDC3BQ96NL0 473 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 TMEM109Q9BVC6 243 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 NACA2Q9H009 215 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 DEFB129Q9H1M3 183 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 ZNF277Q9NRM2 450 aaPredicted RBP12.38□□□□□ -0.43
SYNE2-207ENST00000458046 R3HDM2Q9Y2K5 976 aaKnown RBP12.38□□□□□ -0.43
SYNE2-207ENST00000458046 TELO2Q9Y4R8 837 aa12.38□□□□□ -0.43
SYNE2-207ENST00000458046 ASNSP08243 561 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 GNA15P30679 374 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 MAN2A2P49641 1150 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 ITGA8P53708 1063 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 PLIN5Q00G26 463 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 ITKQ08881 620 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 CBX2Q14781 532 aaPredicted RBP12.37□□□□□ -0.43
SYNE2-207ENST00000458046 PRUNE1Q86TP1 453 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 CEP57Q86XR8 500 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 CCDC50Q8IVM0 306 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 DRAXINQ8NBI3 349 aaPredicted RBP12.37□□□□□ -0.43
SYNE2-207ENST00000458046 CEP170P1Q96L14 293 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 DHRS1Q96LJ7 313 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 STMN4Q9H169 189 aaPredicted RBP12.37□□□□□ -0.43
SYNE2-207ENST00000458046 ZNF304Q9HCX3 659 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms