RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, human

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIF1-208	ENST00000457745	TXNRD3NB	Q6F5E7	133 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	PLEKHA7	Q6IQ23	1121 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	FAM183BP	Q6ZVS7	135 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	ZNF365	Q70YC5	407 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	OTOP2	Q7RTS6	562 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	NT5DC3	Q86UY8	548 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	VPS36	Q86VN1	386 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	UNC93A	Q86WB7	457 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	XYLT1	Q86Y38	959 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	ARFGAP1	Q8N6T3	406 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	EMC1	Q8N766	993 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	B3GALNT2	Q8NCR0	500 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	ZNF689	Q96CS4	500 aa	Predicted RBP	9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	MS4A14	Q96JA4	679 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	NAPG	Q99747	312 aa	Predicted RBP	9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	SMO	Q99835	787 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	LHX5	Q9H2C1	402 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	SNX25	Q9H3E2	840 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	UBN1	Q9NPG3	1134 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	ADAM22	Q9P0K1	906 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	CTTNBP2NL	Q9P2B4	639 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	PCDHB7	Q9Y5E2	793 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	MRFAP1	Q9Y605	127 aa		9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	MRPL42	Q9Y6G3	142 aa	Known RBP	9.25	□□□□□ -0.93
RIF1-208	ENST00000457745	LCHN	A4D1U4	455 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	GRXCR2	A6NFK2	248 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	HHLA1	C9JL84	531 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745		E5RJQ4	531 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	TMEM189-UBE2V1	I3L0A0	370 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	ARHGAP33	O14559	1287 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	PAPSS1	O43252	624 aa	Predicted RBP	9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	HUS1	O60921	280 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	P4HA1	P13674	534 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	TFE3	P19532	575 aa	Predicted RBP	9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	NOP2	P46087	812 aa	Known RBP	9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	NSF	P46459	744 aa	Known RBP	9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	GPR15	P49685	360 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	PGF	P49763	221 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	HADHB	P55084	474 aa	Known RBP	9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	PITX1	P78337	314 aa	Predicted RBP	9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	ADCY1	Q08828	1119 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	MESD	Q14696	234 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	RTP2	Q5QGT7	225 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	C10orf76	Q5T2E6	689 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	OTUD1	Q5VV17	481 aa	Predicted RBP	9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	DCLRE1A	Q6PJP8	1040 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	TRIM72	Q6ZMU5	477 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	BHLHA9	Q7RTU4	235 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	FAM35A	Q86V20	835 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	ZDHHC14	Q8IZN3	488 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	ZNF564	Q8TBZ8	553 aa	Predicted RBP	9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	URGCP	Q8TCY9	931 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	SLC35F5	Q8WV83	523 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	CD101	Q93033	1021 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	TOP1MT	Q969P6	601 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	MYLPF	Q96A32	169 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	PCED1B	Q96HM7	432 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	NOX5	Q96PH1	765 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	KCNK16	Q96T55	309 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	CARD6	Q9BX69	1037 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	SLC4A5	Q9BY07	1137 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	TSGA10	Q9BZW7	698 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	EPC1	Q9H2F5	836 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	PDCL3	Q9H2J4	239 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	CRISPLD1	Q9H336	500 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	IL23A	Q9NPF7	189 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	AVEN	Q9NQS1	362 aa	Predicted RBP	9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	LRFN2	Q9ULH4	789 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	PCDHGA10	Q9Y5H3	936 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745		V9GYY5	206 aa	Predicted RBP	9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	ATG2A	Q2TAZ0	1938 aa		9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	MKI67	P46013	3256 aa	Known RBP	9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	ZNF638	Q14966	1978 aa	Known RBP	9.24	□□□□□ -0.93
RIF1-208	ENST00000457745	GRAP2	O75791	330 aa		9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	SOAT2	O75908	522 aa		9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	LSM8	O95777	96 aa	Known RBP	9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	RPL17	P18621	184 aa	Known RBP	9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	COMT	P21964	271 aa		9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	RFC2	P35250	354 aa		9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	NDUFV1	P49821	464 aa		9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	NAP1L1	P55209	391 aa	Known RBP	9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	RNASEL	Q05823	741 aa	Known RBP	9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	ZNF211	Q13398	564 aa	Predicted RBP	9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	IKBKE	Q14164	716 aa		9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	ATP13A4	Q4VNC1	1196 aa		9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	INTS6L	Q5JSJ4	861 aa	Known RBP	9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	TMEM240	Q5SV17	173 aa		9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	COL13A1	Q5TAT6	717 aa	Predicted RBP	9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	SH3PXD2A	Q5TCZ1	1133 aa		9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	SDHAF4	Q5VUM1	108 aa		9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	FAM109B	Q6ICB4	259 aa	Predicted RBP	9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	FAM171B	Q6P995	826 aa		9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	PRSS55	Q6UWB4	352 aa	Predicted RBP	9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	CLEC20A	Q6ZU45	233 aa		9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	HFE2	Q6ZVN8	426 aa		9.23	□□□□□ -0.93
RIF1-208	ENST00000457745	CREG2	Q8IUH2	290 aa		9.23	□□□□□ -0.93

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