RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 USP46P62068 366 aa17.16■□□□□ 0.34
SCAMP4-205ENST00000452128 KLHL10Q6JEL2 608 aa17.16■□□□□ 0.34
SCAMP4-205ENST00000452128 SCARA5Q6ZMJ2 495 aa17.16■□□□□ 0.34
SCAMP4-205ENST00000452128 IRF2BP1Q8IU81 584 aa17.16■□□□□ 0.34
SCAMP4-205ENST00000452128 MFSD6LQ8IWD5 586 aa17.16■□□□□ 0.34
SCAMP4-205ENST00000452128 FBXL13Q8NEE6 735 aa17.16■□□□□ 0.34
SCAMP4-205ENST00000452128 TATDN2Q93075 761 aa17.16■□□□□ 0.34
SCAMP4-205ENST00000452128 NIF3L1Q9GZT8 377 aa17.16■□□□□ 0.34
SCAMP4-205ENST00000452128 METTL14Q9HCE5 456 aaKnown RBP17.16■□□□□ 0.34
SCAMP4-205ENST00000452128 TRPV5Q9NQA5 729 aa17.16■□□□□ 0.34
SCAMP4-205ENST00000452128 F8VP50 259 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 TNFRSF10BO14763 440 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 PI15O43692 258 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 STX10O60499 249 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 CILPO75339 1184 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 P4HA1P13674 534 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 MXI1P50539 228 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 STARD6P59095 220 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 CYP4F8P98187 520 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 FCHO2Q0JRZ9 810 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 PAK1Q13153 545 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 GPR158Q5T848 1215 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 PHLDB3Q6NSJ2 640 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 ACOT1Q86TX2 421 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 MON1AQ86VX9 555 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 TRIM59Q8IWR1 403 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 SIX5Q8N196 739 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 TMEM105Q8N8V8 129 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 ZMIZ2Q8NF64 920 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 FAM200AQ8TCP9 573 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 GPT2Q8TD30 523 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 ELOVL4Q9GZR5 314 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 CSNK1G1Q9HCP0 422 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.15■□□□□ 0.342e-7■■■■■ 67.3
SCAMP4-205ENST00000452128 OBP2AQ9NY56 170 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 GCNT4Q9P109 453 aa17.15■□□□□ 0.34
SCAMP4-205ENST00000452128 PTPRDP23468 1912 aa17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 BICDL2A1A5D9 508 aa17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 HEPACAM2A8MVW5 462 aa17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 PRAMEF12O95522 483 aa17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 STX17P56962 302 aa17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 CYP27A1Q02318 531 aa17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 SLC44A4Q53GD3 710 aa17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 ASTLQ6HA08 431 aaPredicted RBP17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 SCN4BQ8IWT1 228 aa17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 ZNF687Q8N1G0 1237 aa17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 UBR7Q8N806 425 aa17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 C12orf29Q8N999 325 aa17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 RIN3Q8TB24 985 aa17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 E2F7Q96AV8 911 aa17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 TNIP3Q96KP6 325 aa17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 KCNH6Q9H252 994 aa17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 FAM124BQ9H5Z6 455 aaPredicted RBP17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 MMRN2Q9H8L6 949 aa17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 RWDD2AQ9UIY3 292 aa17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 CTNND2Q9UQB3 1225 aa17.14■□□□□ 0.33
SCAMP4-205ENST00000452128 FAM92AA1XBS5 289 aa17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 PSMC3P17980 439 aa17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 GRIK1P39086 918 aa17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 FMO5P49326 533 aa17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 ORC1Q13415 861 aa17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 TXNDC8Q6A555 127 aa17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 RBM43Q6ZSC3 357 aaKnown RBP17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 FAM35AQ86V20 835 aa17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 GPIHBP1Q8IV16 184 aa17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 CMTM8Q8IZV2 173 aa17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 MLKLQ8NB16 471 aa17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 DEPDC1BQ8WUY9 529 aa17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 SLC22A12Q96S37 553 aa17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 KCNK16Q96T55 309 aa17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 HNRNPABQ99729 332 aaKnown RBP17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 SMOQ99835 787 aa17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 ARID3AQ99856 593 aa17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 SRRTQ9BXP5 876 aaKnown RBP17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 DLGAP2Q9P1A6 1054 aa17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 UXTQ9UBK9 157 aaPredicted RBP17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 ZMYM5Q9UJ78 669 aa17.13■□□□□ 0.33
SCAMP4-205ENST00000452128 HHLA1C9JL84 531 aa17.12■□□□□ 0.33
SCAMP4-205ENST00000452128 TRIM66O15016 1216 aa17.12■□□□□ 0.33
SCAMP4-205ENST00000452128 BEST1O76090 585 aa17.12■□□□□ 0.33
SCAMP4-205ENST00000452128 AOC1P19801 751 aa17.12■□□□□ 0.33
SCAMP4-205ENST00000452128 DDX6P26196 483 aaKnown RBP eCLIP17.12■□□□□ 0.33
SCAMP4-205ENST00000452128 FZD5Q13467 585 aa17.12■□□□□ 0.33
SCAMP4-205ENST00000452128 GRM2Q14416 872 aa17.12■□□□□ 0.33
SCAMP4-205ENST00000452128 ARHGAP15Q53QZ3 475 aa17.12■□□□□ 0.33
SCAMP4-205ENST00000452128 DENND5BQ6ZUT9 1274 aa17.12■□□□□ 0.33
SCAMP4-205ENST00000452128 DNASE1L2Q92874 299 aa17.12■□□□□ 0.33
SCAMP4-205ENST00000452128 USP13Q92995 863 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-205ENST00000452128 TRMT61BQ9BVS5 477 aaKnown RBP17.12■□□□□ 0.33
SCAMP4-205ENST00000452128 ARHGEF3Q9NR81 526 aa17.12■□□□□ 0.33
SCAMP4-205ENST00000452128 FBXL21Q9UKT6 434 aa17.12■□□□□ 0.33
SCAMP4-205ENST00000452128 CA14Q9ULX7 337 aa17.12■□□□□ 0.33
SCAMP4-205ENST00000452128 MAGED2Q9UNF1 606 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-205ENST00000452128 GREB1Q4ZG55 1949 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 ZNF840PA6NDX5 716 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 P4HA2O15460 535 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 GNA14O95837 355 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 CCDC130P13994 396 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 NUBP1P53384 320 aa17.11■□□□□ 0.33
SCAMP4-205ENST00000452128 RAD23BP54727 409 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms