RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 GPC5P78333 572 aa12.71□□□□□ -0.37
LSP1P3-201ENST00000449530 CWF19L1Q69YN2 538 aaKnown RBP12.71□□□□□ -0.37
LSP1P3-201ENST00000449530 TTI2Q6NXR4 508 aa12.71□□□□□ -0.37
LSP1P3-201ENST00000449530 GPIHBP1Q8IV16 184 aa12.71□□□□□ -0.37
LSP1P3-201ENST00000449530 TRIML1Q8N9V2 468 aa12.71□□□□□ -0.37
LSP1P3-201ENST00000449530 FBXL13Q8NEE6 735 aa12.71□□□□□ -0.37
LSP1P3-201ENST00000449530 FLCNQ8NFG4 579 aa12.71□□□□□ -0.37
LSP1P3-201ENST00000449530 SEMA4DQ92854 862 aa12.71□□□□□ -0.37
LSP1P3-201ENST00000449530 CEP63Q96MT8 703 aa12.71□□□□□ -0.37
LSP1P3-201ENST00000449530 IPO9Q96P70 1041 aaKnown RBP12.71□□□□□ -0.37
LSP1P3-201ENST00000449530 DUSP9Q99956 384 aaKnown RBP12.71□□□□□ -0.37
LSP1P3-201ENST00000449530 BCO2Q9BYV7 579 aa12.71□□□□□ -0.37
LSP1P3-201ENST00000449530 ZNF518BQ9C0D4 1074 aa12.71□□□□□ -0.37
LSP1P3-201ENST00000449530 GPR88Q9GZN0 384 aa12.71□□□□□ -0.37
LSP1P3-201ENST00000449530 ELOVL4Q9GZR5 314 aa12.71□□□□□ -0.37
LSP1P3-201ENST00000449530 ZFP14Q9HCL3 533 aa12.71□□□□□ -0.37
LSP1P3-201ENST00000449530 ARHGEF3Q9NR81 526 aa12.71□□□□□ -0.37
LSP1P3-201ENST00000449530 KIAA1468Q9P260 1216 aa12.71□□□□□ -0.37
LSP1P3-201ENST00000449530 ATP8B3O60423 1300 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 KRBA1A5PL33 1030 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 F8VP50 259 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 TRIM66O15016 1216 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 PRAMEF12O95522 483 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 CD58P19256 250 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 NDST1P52848 882 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 CACNA2D1P54289 1103 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 CBWD6Q4V339 395 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 CBWD3Q5JTY5 395 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 CBWD5Q5RIA9 395 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 IER5LQ5T953 404 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 VSTM1Q6UX27 236 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 VITQ6UXI7 678 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 CLEC17AQ6ZS10 378 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 TMEM150AQ86TG1 271 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 ACOT1Q86TX2 421 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 FAM35AQ86V20 835 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 SLC35C1Q96A29 364 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 RSPRY1Q96DX4 576 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 TRMT2BQ96GJ1 504 aaKnown RBP12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 TNIP3Q96KP6 325 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 GBP4Q96PP9 640 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 MED10Q9BTT4 135 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 B3GNT5Q9BYG0 378 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 NUP62CLQ9H1M0 184 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 KRT82Q9NSB4 513 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 UXTQ9UBK9 157 aaPredicted RBP12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 WNT16Q9UBV4 365 aa12.7□□□□□ -0.38
LSP1P3-201ENST00000449530 HEPACAM2A8MVW5 462 aa12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 TADA3O75528 432 aa12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 CCDC130P13994 396 aa12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 MCCD1P59942 119 aaPredicted RBP12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 INCA1Q0VD86 236 aa12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 DENND5BQ6ZUT9 1274 aa12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 ARID3BQ8IVW6 561 aaPredicted RBP12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 MRPS31Q92665 395 aaKnown RBP12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 SPATA17Q96L03 361 aa12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 TWNKQ96RR1 684 aa12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 SMG9Q9H0W8 520 aaKnown RBP12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 TASP1Q9H6P5 420 aa12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 TBC1D17Q9HA65 648 aa12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 TRPV4Q9HBA0 871 aa12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 METTL14Q9HCE5 456 aaKnown RBP12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 LMBRD1Q9NUN5 540 aa12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 FAM49BQ9NUQ9 324 aa12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 TMEM30AQ9NV96 361 aa12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 RAB20Q9NX57 234 aa12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 ZFHX2Q9C0A1 2572 aaPredicted RBP12.69□□□□□ -0.38
LSP1P3-201ENST00000449530 STK25O00506 426 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 DPYSL4O14531 572 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 F11P03951 625 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 NPR3P17342 541 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 PSMC3P17980 439 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 DDX6P26196 483 aaKnown RBP eCLIP12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 GDI1P31150 447 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 USP46P62068 366 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 PFKPQ01813 784 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 IFRD2Q12894 506 aaPredicted RBP12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 WDR44Q5JSH3 913 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 TXNDC8Q6A555 127 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 ASTLQ6HA08 431 aaPredicted RBP12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 FOXR2Q6PJQ5 311 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 FRMD5Q7Z6J6 570 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 FILIP1Q7Z7B0 1213 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 UNC93AQ86WB7 457 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 YAF2Q8IY57 180 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 TMEM105Q8N8V8 129 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 MAB21L3Q8N8X9 362 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 SLC2A14Q8TDB8 520 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 DEPDC1BQ8WUY9 529 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 SMARCD1Q96GM5 515 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 C8orf48Q96LL4 319 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 MYRFLQ96LU7 910 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 ARID3AQ99856 593 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 TRMT61BQ9BVS5 477 aaKnown RBP12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 BRD9Q9H8M2 597 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 CYP3A43Q9HB55 503 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 TRPC7Q9HCX4 862 aa12.68□□□□□ -0.38
LSP1P3-201ENST00000449530 CILPO75339 1184 aa12.67□□□□□ -0.38
LSP1P3-201ENST00000449530 AP1G2O75843 785 aa12.67□□□□□ -0.38
LSP1P3-201ENST00000449530 TRIM21P19474 475 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms