RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 NPR3P17342 541 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 BDNFP23560 247 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 CDH5P33151 784 aaPredicted RBP15.48■□□□□ 0.07
TNF-208ENST00000449264 OR1D2P34982 312 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 GPD2P43304 727 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 RGS7P49802 495 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 VAV2P52735 878 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 SLC8A3P57103 927 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 ROR1Q01973 937 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 PDCLQ13371 301 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 PTPN14Q15678 1187 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 PKDCCQ504Y2 493 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 ACAD10Q6JQN1 1059 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 MMS22LQ6ZRQ5 1243 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 H2AFVQ71UI9 128 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 WDTC1Q8N5D0 677 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 KIAA1524Q8TCG1 905 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 POF1BQ8WVV4 589 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 SAMD11Q96NU1 681 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 OXCT2Q9BYC2 517 aaPredicted RBP15.48■□□□□ 0.07
TNF-208ENST00000449264 SYNCQ9H7C4 482 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 BACE2Q9Y5Z0 518 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 TRIOBPQ9H2D6 2365 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 RCCD1A6NED2 376 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 USP27XA6NNY8 438 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 PIK3R2O00459 728 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 ZSCAN12O43309 604 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 ATMINO43313 823 aaPredicted RBP15.47■□□□□ 0.07
TNF-208ENST00000449264 CACNA2D1P54289 1103 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 GALCP54803 685 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 MAP3K7CLP57077 242 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 ERVK-21P61565 698 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 NFE2Q16621 373 aaPredicted RBP15.47■□□□□ 0.07
TNF-208ENST00000449264 C10orf76Q5T2E6 689 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 PLPP4Q5VZY2 271 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 RNF19BQ6ZMZ0 732 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 CLEC20AQ6ZU45 233 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 ZSCAN30Q86W11 494 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 SPPL3Q8TCT6 385 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 ZNF653Q96CK0 615 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 NOX5Q96PH1 765 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 CLSTN3Q9BQT9 956 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 DUSP16Q9BY84 665 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 ISCUQ9H1K1 167 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 SLC28A3Q9HAS3 691 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 LZTFL1Q9NQ48 299 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 TLR9Q9NR96 1032 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 LZTS1Q9Y250 596 aa15.47■□□□□ 0.07
TNF-208ENST00000449264 PATJQ8NI35 1801 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 WDR27A2RRH5 827 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 MTMR11A4FU01 709 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 GRM6O15303 877 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 BEST1O76090 585 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 RB1P06400 928 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 SETSIPP0DME0 302 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 CYP2F1P24903 491 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 DNAJB1P25685 340 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 MSNP26038 577 aaKnown RBP15.46■□□□□ 0.07
TNF-208ENST00000449264 ERVFC1P60507 584 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 GPR17Q13304 367 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 PTPN20Q4JDL3 420 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 CYP4A22Q5TCH4 519 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 SLC8B1Q6J4K2 584 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 MON1BQ7L1V2 547 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 PHLDB2Q86SQ0 1253 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 ERICH1Q86X53 443 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 CCAR2Q8N163 923 aaKnown RBP15.46■□□□□ 0.07
TNF-208ENST00000449264 ATAD1Q8NBU5 361 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 ARNTL2Q8WYA1 636 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 CTNNBL1Q8WYA6 563 aaPredicted RBP15.46■□□□□ 0.07
TNF-208ENST00000449264 PPP1R13BQ96KQ4 1090 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 CPXM1Q96SM3 734 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 THAP2Q9H0W7 228 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 TMEM30AQ9NV96 361 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 ADAM22Q9P0K1 906 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 TJP2Q9UDY2 1190 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 TRIM10Q9UDY6 481 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 PCDHB5Q9Y5E4 795 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 PCDHGC5Q9Y5F6 944 aa15.46■□□□□ 0.07
TNF-208ENST00000449264 COL4A4P53420 1690 aaPredicted RBP15.46■□□□□ 0.07
TNF-208ENST00000449264 ANKRD62A6NC57 917 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 CXCL14O95715 111 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 CREMQ03060 361 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 UBE3AQ05086 875 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 GPM6BQ13491 265 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 ARHGAP29Q52LW3 1261 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 PPP1R2P3Q6NXS1 205 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 PMF1Q6P1K2 205 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 PHF13Q86YI8 300 aaPredicted RBP15.45■□□□□ 0.06
TNF-208ENST00000449264 SCN4BQ8IWT1 228 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 MCOLN2Q8IZK6 566 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 TXLNBQ8N3L3 684 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 TTC9BQ8N6N2 239 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 MSANTD4Q8NCY6 345 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 IPO4Q8TEX9 1081 aaKnown RBP15.45■□□□□ 0.06
TNF-208ENST00000449264 KCNK16Q96T55 309 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 SMOQ99835 787 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 LACRTQ9GZZ8 138 aa15.45■□□□□ 0.06
TNF-208ENST00000449264 DMAP1Q9NPF5 467 aaPredicted RBP15.45■□□□□ 0.06
TNF-208ENST00000449264 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms