RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 CDC25CP30307 473 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 USP46P62068 366 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 GPC5P78333 572 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 INCA1Q0VD86 236 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 GRM2Q14416 872 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 WDR44Q5JSH3 913 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 VSTM1Q6UX27 236 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 PAQR9Q6ZVX9 377 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 TRIM59Q8IWR1 403 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 FUKQ8N0W3 1084 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 C12orf29Q8N999 325 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 MLKLQ8NB16 471 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 WHAMMQ8TF30 809 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 SMARCD2Q92925 531 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 PBXIP1Q96AQ6 731 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 RSPRY1Q96DX4 576 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 TNIP3Q96KP6 325 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 GCNAQ96QF7 691 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 ELOVL4Q9GZR5 314 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 CYP3A43Q9HB55 503 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 FBXL21Q9UKT6 434 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 COQ4Q9Y3A0 265 aa15.78■□□□□ 0.12
HDAC4-204ENST00000446876 TICRRQ7Z2Z1 1910 aa15.77■□□□□ 0.12
HDAC4-204ENST00000446876 TRIM66O15016 1216 aa15.77■□□□□ 0.12
HDAC4-204ENST00000446876 CILPO75339 1184 aa15.77■□□□□ 0.12
HDAC4-204ENST00000446876 ECI2O75521 394 aa15.77■□□□□ 0.12
HDAC4-204ENST00000446876 FGF19O95750 216 aa15.77■□□□□ 0.12
HDAC4-204ENST00000446876 ANXA13P27216 316 aa15.77■□□□□ 0.12
HDAC4-204ENST00000446876 IFRD2Q12894 506 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-204ENST00000446876 ZNF394Q53GI3 561 aa15.77■□□□□ 0.12
HDAC4-204ENST00000446876 ARHGAP15Q53QZ3 475 aa15.77■□□□□ 0.12
HDAC4-204ENST00000446876 IER5LQ5T953 404 aa15.77■□□□□ 0.12
HDAC4-204ENST00000446876 UNC93AQ86WB7 457 aa15.77■□□□□ 0.12
HDAC4-204ENST00000446876 CREBRFQ8IUR6 639 aa15.77■□□□□ 0.12
HDAC4-204ENST00000446876 SLC2A14Q8TDB8 520 aa15.77■□□□□ 0.12
HDAC4-204ENST00000446876 ELSPBP1Q96BH3 223 aa15.77■□□□□ 0.12
HDAC4-204ENST00000446876 CNOT6LQ96LI5 555 aaKnown RBP15.77■□□□□ 0.12
HDAC4-204ENST00000446876 KCNK16Q96T55 309 aa15.77■□□□□ 0.12
HDAC4-204ENST00000446876 SMG9Q9H0W8 520 aaKnown RBP15.77■□□□□ 0.12
HDAC4-204ENST00000446876 ZFP14Q9HCL3 533 aa15.77■□□□□ 0.12
HDAC4-204ENST00000446876 KRT82Q9NSB4 513 aa15.77■□□□□ 0.12
HDAC4-204ENST00000446876 CA14Q9ULX7 337 aa15.77■□□□□ 0.12
HDAC4-204ENST00000446876 MYO16Q9Y6X6 1858 aa15.77■□□□□ 0.11
HDAC4-204ENST00000446876 ATP8B3O60423 1300 aa15.76■□□□□ 0.11
HDAC4-204ENST00000446876 PRAMEF12O95522 483 aa15.76■□□□□ 0.11
HDAC4-204ENST00000446876 GNA14O95837 355 aa15.76■□□□□ 0.11
HDAC4-204ENST00000446876 ADORA2BP29275 332 aa15.76■□□□□ 0.11
HDAC4-204ENST00000446876 MARSP56192 900 aaKnown RBP15.76■□□□□ 0.11
HDAC4-204ENST00000446876 KCNH2Q12809 1159 aa15.76■□□□□ 0.11
HDAC4-204ENST00000446876 TXNDC8Q6A555 127 aa15.76■□□□□ 0.11
HDAC4-204ENST00000446876 VITQ6UXI7 678 aa15.76■□□□□ 0.11
HDAC4-204ENST00000446876 IRF2BP1Q8IU81 584 aa15.76■□□□□ 0.11
HDAC4-204ENST00000446876 ARID3BQ8IVW6 561 aaPredicted RBP15.76■□□□□ 0.11
HDAC4-204ENST00000446876 SIX5Q8N196 739 aa15.76■□□□□ 0.11
HDAC4-204ENST00000446876 CRYBG2Q8N1P7 616 aa15.76■□□□□ 0.11
HDAC4-204ENST00000446876 MAB21L3Q8N8X9 362 aa15.76■□□□□ 0.11
HDAC4-204ENST00000446876 TRMT2BQ96GJ1 504 aaKnown RBP15.76■□□□□ 0.11
HDAC4-204ENST00000446876 SPATA17Q96L03 361 aa15.76■□□□□ 0.11
HDAC4-204ENST00000446876 C8orf48Q96LL4 319 aa15.76■□□□□ 0.11
HDAC4-204ENST00000446876 NT5C1AQ9BXI3 368 aa15.76■□□□□ 0.11
HDAC4-204ENST00000446876 SLC46A2Q9BY10 475 aa15.76■□□□□ 0.11
HDAC4-204ENST00000446876 TASP1Q9H6P5 420 aa15.76■□□□□ 0.11
HDAC4-204ENST00000446876 CISHQ9NSE2 258 aa15.76■□□□□ 0.11
HDAC4-204ENST00000446876 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.76■□□□□ 0.11
HDAC4-204ENST00000446876 COL4A2P08572 1712 aa15.76■□□□□ 0.11
HDAC4-204ENST00000446876 HELZP42694 1942 aaKnown RBP15.75■□□□□ 0.11
HDAC4-204ENST00000446876 KRBA1A5PL33 1030 aa15.75■□□□□ 0.11
HDAC4-204ENST00000446876 HEPACAM2A8MVW5 462 aa15.75■□□□□ 0.11
HDAC4-204ENST00000446876 AP1G2O75843 785 aa15.75■□□□□ 0.11
HDAC4-204ENST00000446876 BEST1O76090 585 aa15.75■□□□□ 0.11
HDAC4-204ENST00000446876 FGFR1OPO95684 399 aaKnown RBP15.75■□□□□ 0.11
HDAC4-204ENST00000446876 CCDC192P0DO97 292 aa15.75■□□□□ 0.11
HDAC4-204ENST00000446876 CUL2Q13617 745 aa15.75■□□□□ 0.11
HDAC4-204ENST00000446876 HSP90AA4PQ58FG1 418 aa15.75■□□□□ 0.11
HDAC4-204ENST00000446876 RBM43Q6ZSC3 357 aaKnown RBP15.75■□□□□ 0.11
HDAC4-204ENST00000446876 DENND5BQ6ZUT9 1274 aa15.75■□□□□ 0.11
HDAC4-204ENST00000446876 ZMIZ2Q8NF64 920 aa15.75■□□□□ 0.11
HDAC4-204ENST00000446876 JAKMIP2Q96AA8 810 aa15.75■□□□□ 0.11
HDAC4-204ENST00000446876 SMARCD1Q96GM5 515 aa15.75■□□□□ 0.11
HDAC4-204ENST00000446876 MYRFLQ96LU7 910 aa15.75■□□□□ 0.11
HDAC4-204ENST00000446876 SMOQ99835 787 aa15.75■□□□□ 0.11
HDAC4-204ENST00000446876 GPR88Q9GZN0 384 aa15.75■□□□□ 0.11
HDAC4-204ENST00000446876 TRPV4Q9HBA0 871 aa15.75■□□□□ 0.11
HDAC4-204ENST00000446876 TRPC7Q9HCX4 862 aa15.75■□□□□ 0.11
HDAC4-204ENST00000446876 SLC2A4RGQ9NR83 387 aa15.75■□□□□ 0.11
HDAC4-204ENST00000446876 KIF26AQ9ULI4 1882 aaPredicted RBP15.75■□□□□ 0.11
HDAC4-204ENST00000446876 ZNF318Q5VUA4 2279 aa15.74■□□□□ 0.11
HDAC4-204ENST00000446876 MBD3O95983 291 aa15.74■□□□□ 0.11
HDAC4-204ENST00000446876 AFPP02771 609 aaKnown RBP15.74■□□□□ 0.11
HDAC4-204ENST00000446876 RAD23BP54727 409 aa15.74■□□□□ 0.11
HDAC4-204ENST00000446876 VCPP55072 806 aaKnown RBP15.74■□□□□ 0.11
HDAC4-204ENST00000446876 TPD52L1Q16890 204 aaPredicted RBP15.74■□□□□ 0.11
HDAC4-204ENST00000446876 BMP8AQ7Z5Y6 402 aa15.74■□□□□ 0.11
HDAC4-204ENST00000446876 FBXL6Q8N531 539 aa15.74■□□□□ 0.11
HDAC4-204ENST00000446876 LMO3Q8TAP4 145 aa15.74■□□□□ 0.11
HDAC4-204ENST00000446876 MRPS31Q92665 395 aaKnown RBP15.74■□□□□ 0.11
HDAC4-204ENST00000446876 KAT5Q92993 513 aa15.74■□□□□ 0.11
HDAC4-204ENST00000446876 LRRC3BQ96PB8 259 aa15.74■□□□□ 0.11
HDAC4-204ENST00000446876 DMAP1Q9NPF5 467 aaPredicted RBP15.74■□□□□ 0.11
HDAC4-204ENST00000446876 UXTQ9UBK9 157 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms