RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 STIM1Q13586 685 aa22.44■■□□□ 1.18
CDKN3-204ENST00000442975 TXNDC8Q6A555 127 aa22.44■■□□□ 1.18
CDKN3-204ENST00000442975 SPATA20Q8TB22 786 aa22.44■■□□□ 1.18
CDKN3-204ENST00000442975 TAF4BQ92750 862 aa22.44■■□□□ 1.18
CDKN3-204ENST00000442975 TRMT2BQ96GJ1 504 aaKnown RBP22.44■■□□□ 1.18
CDKN3-204ENST00000442975 MED10Q9BTT4 135 aa22.44■■□□□ 1.18
CDKN3-204ENST00000442975 CHMP5Q9NZZ3 219 aa22.44■■□□□ 1.18
CDKN3-204ENST00000442975 MAN1B1Q9UKM7 699 aa22.44■■□□□ 1.18
CDKN3-204ENST00000442975 F8VP50 259 aa22.43■■□□□ 1.18
CDKN3-204ENST00000442975 CLDN5O00501 218 aa22.43■■□□□ 1.18
CDKN3-204ENST00000442975 DDX6P26196 483 aaKnown RBP eCLIP22.43■■□□□ 1.18
CDKN3-204ENST00000442975 ASPAP45381 313 aa22.43■■□□□ 1.18
CDKN3-204ENST00000442975 NOP14P78316 857 aaKnown RBP22.43■■□□□ 1.18
CDKN3-204ENST00000442975 DCAF17Q5H9S7 520 aaPredicted RBP22.43■■□□□ 1.18
CDKN3-204ENST00000442975 ZNF852Q6ZMS4 543 aa22.43■■□□□ 1.18
CDKN3-204ENST00000442975 CMTM8Q8IZV2 173 aa22.43■■□□□ 1.18
CDKN3-204ENST00000442975 TTC16Q8NEE8 873 aa22.43■■□□□ 1.18
CDKN3-204ENST00000442975 CSGALNACT1Q8TDX6 532 aa22.43■■□□□ 1.18
CDKN3-204ENST00000442975 ZFYVE19Q96K21 471 aa22.43■■□□□ 1.18
CDKN3-204ENST00000442975 DDX23Q9BUQ8 820 aaKnown RBP22.43■■□□□ 1.18
CDKN3-204ENST00000442975 GTPBP4Q9BZE4 634 aaKnown RBP22.43■■□□□ 1.18
CDKN3-204ENST00000442975 TMEM8AQ9HCN3 771 aa22.43■■□□□ 1.18
CDKN3-204ENST00000442975 LTB4R2Q9NPC1 389 aa22.43■■□□□ 1.18
CDKN3-204ENST00000442975 PIAS3Q9Y6X2 628 aa22.43■■□□□ 1.18
CDKN3-204ENST00000442975 ATP8B3O60423 1300 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 TRIM49BA6NDI0 452 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 FAM170BA6NMN3 283 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 PSMA7O14818 248 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 MXI1P50539 228 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 PMS1P54277 932 aaKnown RBP22.42■■□□□ 1.18
CDKN3-204ENST00000442975 CACNA2D1P54289 1103 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 FCHO2Q0JRZ9 810 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 COBLL1Q53SF7 1204 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 TCERG1LQ5VWI1 586 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 DENND5BQ6ZUT9 1274 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 ACOT1Q86TX2 421 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 ADSSL1Q8N142 457 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 CCDC150Q8NCX0 1101 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 BPIFB1Q8TDL5 484 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 TNIP3Q96KP6 325 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 SPATA17Q96L03 361 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 MYRFLQ96LU7 910 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 LRRC3BQ96PB8 259 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 PHOX2BQ99453 314 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 B3GNT5Q9BYG0 378 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 IRF2BPLQ9H1B7 796 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 HMGXB4Q9UGU5 601 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 ZMYM5Q9UJ78 669 aa22.42■■□□□ 1.18
CDKN3-204ENST00000442975 MTF2Q9Y483 593 aaPredicted RBP22.42■■□□□ 1.18
CDKN3-204ENST00000442975 BIN1O00499 593 aa22.41■■□□□ 1.18
CDKN3-204ENST00000442975 CHADO15335 359 aa22.41■■□□□ 1.18
CDKN3-204ENST00000442975 SLC16A3O15427 465 aaKnown RBP22.41■■□□□ 1.18
CDKN3-204ENST00000442975 CKMP06732 381 aa22.41■■□□□ 1.18
CDKN3-204ENST00000442975 TARSP26639 723 aaKnown RBP22.41■■□□□ 1.18
CDKN3-204ENST00000442975 NDST1P52848 882 aa22.41■■□□□ 1.18
CDKN3-204ENST00000442975 ENPEPQ07075 957 aa22.41■■□□□ 1.18
CDKN3-204ENST00000442975 IFRD2Q12894 506 aaPredicted RBP22.41■■□□□ 1.18
CDKN3-204ENST00000442975 ANGPT1Q15389 498 aa22.41■■□□□ 1.18
CDKN3-204ENST00000442975 KRT39Q6A163 491 aa22.41■■□□□ 1.18
CDKN3-204ENST00000442975 ANKRD40Q6AI12 368 aa22.41■■□□□ 1.18
CDKN3-204ENST00000442975 KLHL10Q6JEL2 608 aa22.41■■□□□ 1.18
CDKN3-204ENST00000442975 FAM35AQ86V20 835 aa22.41■■□□□ 1.18
CDKN3-204ENST00000442975 MON1AQ86VX9 555 aa22.41■■□□□ 1.18
CDKN3-204ENST00000442975 CELF5Q8N6W0 485 aaKnown RBP22.41■■□□□ 1.18
CDKN3-204ENST00000442975 TTC8Q8TAM2 541 aa22.41■■□□□ 1.18
CDKN3-204ENST00000442975 BCO2Q9BYV7 579 aa22.41■■□□□ 1.18
CDKN3-204ENST00000442975 NIF3L1Q9GZT8 377 aa22.41■■□□□ 1.18
CDKN3-204ENST00000442975 APOBEC3GQ9HC16 384 aaKnown RBP22.41■■□□□ 1.18
CDKN3-204ENST00000442975 OBP2AQ9NY56 170 aa22.41■■□□□ 1.18
CDKN3-204ENST00000442975 NDRG2Q9UN36 371 aaKnown RBP22.41■■□□□ 1.18
CDKN3-204ENST00000442975 CCL26Q9Y258 94 aa22.41■■□□□ 1.18
CDKN3-204ENST00000442975 MRPS17Q9Y2R5 130 aaKnown RBP22.41■■□□□ 1.18
CDKN3-204ENST00000442975 CACNA1HO95180 2353 aa22.4■■□□□ 1.18
CDKN3-204ENST00000442975 ARNTLO00327 626 aa22.4■■□□□ 1.18
CDKN3-204ENST00000442975 STX10O60499 249 aa22.4■■□□□ 1.18
CDKN3-204ENST00000442975 GLULP15104 373 aa22.4■■□□□ 1.18
CDKN3-204ENST00000442975 GTF2H1P32780 548 aa22.4■■□□□ 1.18
CDKN3-204ENST00000442975 KPNA1P52294 538 aaPredicted RBP22.4■■□□□ 1.18
CDKN3-204ENST00000442975 USP46P62068 366 aa22.4■■□□□ 1.18
CDKN3-204ENST00000442975 FKBP3Q00688 224 aaKnown RBP22.4■■□□□ 1.18
CDKN3-204ENST00000442975 LRRC63Q05C16 580 aa22.4■■□□□ 1.18
CDKN3-204ENST00000442975 ARHGAP29Q52LW3 1261 aa22.4■■□□□ 1.18
CDKN3-204ENST00000442975 USP13Q92995 863 aaPredicted RBP22.4■■□□□ 1.18
CDKN3-204ENST00000442975 C8orf48Q96LL4 319 aa22.4■■□□□ 1.18
CDKN3-204ENST00000442975 KRT82Q9NSB4 513 aa22.4■■□□□ 1.18
CDKN3-204ENST00000442975 TMEM30AQ9NV96 361 aa22.4■■□□□ 1.18
CDKN3-204ENST00000442975 THG1LQ9NWX6 298 aaKnown RBP22.4■■□□□ 1.18
CDKN3-204ENST00000442975 TRAV19A0A0A6YYK7 116 aa22.39■■□□□ 1.17
CDKN3-204ENST00000442975 CCDC130P13994 396 aa22.39■■□□□ 1.17
CDKN3-204ENST00000442975 CD58P19256 250 aa22.39■■□□□ 1.17
CDKN3-204ENST00000442975 WEE1P30291 646 aa22.39■■□□□ 1.17
CDKN3-204ENST00000442975 SOX9P48436 509 aa22.39■■□□□ 1.17
CDKN3-204ENST00000442975 ALYREFQ86V81 257 aaKnown RBP22.39■■□□□ 1.17
CDKN3-204ENST00000442975 ELOA2Q8IYF1 753 aaPredicted RBP22.39■■□□□ 1.17
CDKN3-204ENST00000442975 CEP295NLQ96MC4 621 aa22.39■■□□□ 1.17
CDKN3-204ENST00000442975 TRPV5Q9NQA5 729 aa22.39■■□□□ 1.17
CDKN3-204ENST00000442975 FAM49BQ9NUQ9 324 aa22.39■■□□□ 1.17
CDKN3-204ENST00000442975 TDP1Q9NUW8 608 aa22.39■■□□□ 1.17
CDKN3-204ENST00000442975 EHD2Q9NZN4 543 aa22.39■■□□□ 1.17
CDKN3-204ENST00000442975 DLGAP2Q9P1A6 1054 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms