RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 TAS1R2Q8TE23 839 aa23.59■■□□□ 1.37
HDLBP-220ENST00000442730 CEP295NLQ96MC4 621 aa23.59■■□□□ 1.37
HDLBP-220ENST00000442730 IPO9Q96P70 1041 aaKnown RBP23.59■■□□□ 1.37
HDLBP-220ENST00000442730 GTPBP4Q9BZE4 634 aaKnown RBP23.59■■□□□ 1.37
HDLBP-220ENST00000442730 SMG9Q9H0W8 520 aaKnown RBP23.59■■□□□ 1.37
HDLBP-220ENST00000442730 OBP2AQ9NY56 170 aa23.59■■□□□ 1.37
HDLBP-220ENST00000442730 H0Y858 1186 aa23.58■■□□□ 1.37
HDLBP-220ENST00000442730 ZNF263O14978 683 aa23.58■■□□□ 1.37
HDLBP-220ENST00000442730 DCNP07585 359 aaKnown RBP23.58■■□□□ 1.37
HDLBP-220ENST00000442730 CD72P21854 359 aa23.58■■□□□ 1.37
HDLBP-220ENST00000442730 GRIK1P39086 918 aa23.58■■□□□ 1.37
HDLBP-220ENST00000442730 PMS1P54277 932 aaKnown RBP23.58■■□□□ 1.37
HDLBP-220ENST00000442730 CACNA2D1P54289 1103 aa23.58■■□□□ 1.37
HDLBP-220ENST00000442730 CMTM8Q8IZV2 173 aa23.58■■□□□ 1.37
HDLBP-220ENST00000442730 MRPS31Q92665 395 aaKnown RBP23.58■■□□□ 1.37
HDLBP-220ENST00000442730 B3GNT5Q9BYG0 378 aa23.58■■□□□ 1.37
HDLBP-220ENST00000442730 ZNF518BQ9C0D4 1074 aa23.58■■□□□ 1.37
HDLBP-220ENST00000442730 ELOVL4Q9GZR5 314 aa23.58■■□□□ 1.37
HDLBP-220ENST00000442730 LTB4R2Q9NPC1 389 aa23.58■■□□□ 1.37
HDLBP-220ENST00000442730 TMEM30AQ9NV96 361 aa23.58■■□□□ 1.37
HDLBP-220ENST00000442730 MAN1B1Q9UKM7 699 aa23.58■■□□□ 1.37
HDLBP-220ENST00000442730 MTF2Q9Y483 593 aaPredicted RBP23.58■■□□□ 1.37
HDLBP-220ENST00000442730 SOBPA7XYQ1 873 aa23.57■■□□□ 1.36
HDLBP-220ENST00000442730 DPYSL4O14531 572 aa23.57■■□□□ 1.36
HDLBP-220ENST00000442730 TRIM66O15016 1216 aa23.57■■□□□ 1.36
HDLBP-220ENST00000442730 CETN3O15182 167 aa23.57■■□□□ 1.36
HDLBP-220ENST00000442730 LRRN2O75325 713 aa23.57■■□□□ 1.36
HDLBP-220ENST00000442730 EPB41P11171 864 aaKnown RBP23.57■■□□□ 1.36
HDLBP-220ENST00000442730 GLULP15104 373 aa23.57■■□□□ 1.36
HDLBP-220ENST00000442730 UBXN2BQ14CS0 331 aa23.57■■□□□ 1.36
HDLBP-220ENST00000442730 TXNDC8Q6A555 127 aa23.57■■□□□ 1.36
HDLBP-220ENST00000442730 MON1AQ86VX9 555 aa23.57■■□□□ 1.36
HDLBP-220ENST00000442730 YAF2Q8IY57 180 aa23.57■■□□□ 1.36
HDLBP-220ENST00000442730 MAB21L3Q8N8X9 362 aa23.57■■□□□ 1.36
HDLBP-220ENST00000442730 C8orf48Q96LL4 319 aa23.57■■□□□ 1.36
HDLBP-220ENST00000442730 TSG101Q99816 390 aa23.57■■□□□ 1.36
HDLBP-220ENST00000442730 MMRN2Q9H8L6 949 aa23.57■■□□□ 1.36
HDLBP-220ENST00000442730 TMEM8AQ9HCN3 771 aa23.57■■□□□ 1.36
HDLBP-220ENST00000442730 HMGXB4Q9UGU5 601 aa23.57■■□□□ 1.36
HDLBP-220ENST00000442730 TICRRQ7Z2Z1 1910 aa23.57■■□□□ 1.36
HDLBP-220ENST00000442730 MYO15AQ9UKN7 3530 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 TRIM49BA6NDI0 452 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 F8VP50 259 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 CHADO15335 359 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 SLC16A3O15427 465 aaKnown RBP23.56■■□□□ 1.36
HDLBP-220ENST00000442730 ANXA13P27216 316 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 HOXD11P31277 338 aaPredicted RBP23.56■■□□□ 1.36
HDLBP-220ENST00000442730 GTF2H1P32780 548 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 AVPR1AP37288 418 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 USP46P62068 366 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 NOP14P78316 857 aaKnown RBP23.56■■□□□ 1.36
HDLBP-220ENST00000442730 LRRC63Q05C16 580 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 ANKRD40Q6AI12 368 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 TNIP3Q96KP6 325 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 PHOX2BQ99453 314 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 BCO2Q9BYV7 579 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 OSBPL6Q9BZF3 934 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 IRF2BPLQ9H1B7 796 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 APOBEC3GQ9HC16 384 aaKnown RBP23.56■■□□□ 1.36
HDLBP-220ENST00000442730 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.56■■□□□ 1.36
HDLBP-220ENST00000442730 FAM86C1Q9NVL1 165 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 CCL26Q9Y258 94 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 PIAS3Q9Y6X2 628 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 DENND4CQ5VZ89 1909 aa23.56■■□□□ 1.36
HDLBP-220ENST00000442730 KIF26AQ9ULI4 1882 aaPredicted RBP23.56■■□□□ 1.36
HDLBP-220ENST00000442730 CLDN5O00501 218 aa23.55■■□□□ 1.36
HDLBP-220ENST00000442730 TARSP26639 723 aaKnown RBP23.55■■□□□ 1.36
HDLBP-220ENST00000442730 ZNF852Q6ZMS4 543 aa23.55■■□□□ 1.36
HDLBP-220ENST00000442730 DENND5BQ6ZUT9 1274 aa23.55■■□□□ 1.36
HDLBP-220ENST00000442730 CELF5Q8N6W0 485 aaKnown RBP23.55■■□□□ 1.36
HDLBP-220ENST00000442730 BPIFB1Q8TDL5 484 aa23.55■■□□□ 1.36
HDLBP-220ENST00000442730 USP13Q92995 863 aaPredicted RBP23.55■■□□□ 1.36
HDLBP-220ENST00000442730 TTLL2Q9BWV7 592 aa23.55■■□□□ 1.36
HDLBP-220ENST00000442730 IMPG2Q9BZV3 1241 aa23.55■■□□□ 1.36
HDLBP-220ENST00000442730 NIF3L1Q9GZT8 377 aa23.55■■□□□ 1.36
HDLBP-220ENST00000442730 FAM170BA6NMN3 283 aa23.54■■□□□ 1.36
HDLBP-220ENST00000442730 PSMA7O14818 248 aa23.54■■□□□ 1.36
HDLBP-220ENST00000442730 CD44P16070 742 aaKnown RBP23.54■■□□□ 1.36
HDLBP-220ENST00000442730 BMP6P22004 513 aa23.54■■□□□ 1.36
HDLBP-220ENST00000442730 MXI1P50539 228 aa23.54■■□□□ 1.36
HDLBP-220ENST00000442730 NDST1P52848 882 aa23.54■■□□□ 1.36
HDLBP-220ENST00000442730 FKBP3Q00688 224 aaKnown RBP23.54■■□□□ 1.36
HDLBP-220ENST00000442730 ORC1Q13415 861 aa23.54■■□□□ 1.36
HDLBP-220ENST00000442730 ANGPT1Q15389 498 aa23.54■■□□□ 1.36
HDLBP-220ENST00000442730 ARHGAP29Q52LW3 1261 aa23.54■■□□□ 1.36
HDLBP-220ENST00000442730 KRT39Q6A163 491 aa23.54■■□□□ 1.36
HDLBP-220ENST00000442730 ISM2Q6H9L7 571 aa23.54■■□□□ 1.36
HDLBP-220ENST00000442730 FAM35AQ86V20 835 aa23.54■■□□□ 1.36
HDLBP-220ENST00000442730 ZNF687Q8N1G0 1237 aa23.54■■□□□ 1.36
HDLBP-220ENST00000442730 ATOH1Q92858 354 aaPredicted RBP23.54■■□□□ 1.36
HDLBP-220ENST00000442730 ZFYVE19Q96K21 471 aa23.54■■□□□ 1.36
HDLBP-220ENST00000442730 GREB1Q4ZG55 1949 aa23.54■■□□□ 1.36
HDLBP-220ENST00000442730 DMDP11532 3685 aa23.53■■□□□ 1.36
HDLBP-220ENST00000442730 MIA3Q5JRA6 1907 aa23.53■■□□□ 1.36
HDLBP-220ENST00000442730 INCA1Q0VD86 236 aa23.53■■□□□ 1.36
HDLBP-220ENST00000442730 STIM1Q13586 685 aa23.53■■□□□ 1.36
HDLBP-220ENST00000442730 ZNF268Q14587 947 aaPredicted RBP23.53■■□□□ 1.36
HDLBP-220ENST00000442730 PAQR9Q6ZVX9 377 aa23.53■■□□□ 1.36
HDLBP-220ENST00000442730 ACOT1Q86TX2 421 aa23.53■■□□□ 1.36
HDLBP-220ENST00000442730 UNC93AQ86WB7 457 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms